RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 C15orf39Q6ZRI6 1047 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ALLCQ8N6M5 410 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 LZICQ8WZA0 190 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 NR1H4Q96RI1 486 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ZBTB18Q99592 522 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CGRRF1Q99675 332 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 SYT15Q9BQS2 421 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 RUBCNLQ9H714 662 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ARHGEF3Q9NR81 526 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 RAD18Q9NS91 495 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ZMYND8Q9ULU4 1186 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 SMG5Q9UPR3 1016 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 KAT6AQ92794 2004 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 KPNA3O00505 521 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 TCEA3O75764 348 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 DCTN3O75935 186 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 MMP8P22894 467 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ADRA1DP25100 572 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC11A2P49281 568 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PTP4A2Q12974 167 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 TAF11Q15544 211 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC39A12Q504Y0 691 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 RPAINQ86UA6 219 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 TTC39CQ8N584 583 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 VCPIP1Q96JH7 1222 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 HAPLN2Q9GZV7 340 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 GOLGA2P5Q9HBQ8 144 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 NT5MQ9NPB1 228 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CYP39A1Q9NYL5 469 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ZFP69BQ9UJL9 534 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 RPS6KL1Q9Y6S9 549 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 TMEM191CA6NGB0 347 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 LACTBL1A8MY62 500 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 GYG2O15488 501 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 TRIM16O95361 564 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 OGDHQ02218 1023 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PTPN11Q06124 597 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 EFHC1Q5JVL4 640 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 USP50Q70EL3 339 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 LONP2Q86WA8 852 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CD99L2Q8TCZ2 262 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 FOXP3Q9BZS1 431 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 VCX3AQ9NNX9 186 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PRKAG3Q9UGI9 489 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 TSPAN16Q9UKR8 245 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PLA2G4CQ9UP65 541 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CHKBQ9Y259 395 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ACTL7BQ9Y614 415 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 RGS20O76081 388 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 CCDC130P13994 396 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 HMOX2P30519 316 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 NME5P56597 212 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 NOGQ13253 232 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 ATG16L1Q676U5 607 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 JADE3Q92613 823 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 MIEF2Q96C03 454 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 CCDC90BQ9GZT6 254 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 SCHIP1Q9P0W5 487 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 EPS15L1Q9UBC2 864 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 CACNG4Q9UBN1 327 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 BCAP29Q9UHQ4 241 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 PCDHGB4Q9UN71 923 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 SHOC2Q9UQ13 582 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 RNF103-CHMP3A0A140T963 221 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 ABHD2P08910 425 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 USP17L7P0C7H9 530 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 EIF4BP23588 611 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 PAX7P23759 505 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 NRLP54845 237 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 GEMIN4P57678 1058 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 PLD1Q13393 1074 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 ANKRD22Q5VYY1 191 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 GPR142Q7Z601 462 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 TRIM42Q8IWZ5 723 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF614Q8N883 585 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 FBXO36Q8NEA4 188 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 FLCNQ8NFG4 579 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 RNPEPQ9H4A4 650 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 RSAD1Q9HA92 442 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 DDX56Q9NY93 547 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 WDR35Q9P2L0 1181 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 COL2A1P02458 1487 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 hCG_1818297A0A087WSY0 165 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 CPA2P48052 419 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 RAD23BP54727 409 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 ALDH18A1P54886 795 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 GDF10P55107 478 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 PIGHQ14442 188 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 PDK4Q16654 411 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 ARHGAP15Q53QZ3 475 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 WSCD1Q658N2 575 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 KRT80Q6KB66 452 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF280DQ6N043 979 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 ABHD15Q6UXT9 468 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 NLRP9Q7RTR0 991 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 MTDHQ86UE4 582 aaKnown RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 EMID1Q96A84 441 aaPredicted RBP8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 PAFAH2Q99487 392 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 TM6SF2Q9BZW4 377 aa8.5□□□□□ -1.05
PTPDC1-204ENST00000620992 CD274Q9NZQ7 290 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms