RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 LRMDAQ9H2I8 198 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 FLT4P35916 1363 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 SLC22A1O15245 554 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 MPZL2O60487 215 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CDC40O60508 579 aaKnown RBP eCLIP3.15□□□□□ -1.9
NEB-220ENST00000618972 FGRP09769 529 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 NUDT7P0C024 238 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CHN2P52757 468 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CHRNB3Q05901 458 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 RALGPS1Q5JS13 557 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 RNF43Q68DV7 783 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 DHRSXQ8N5I4 330 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 EMID1Q96A84 441 aaPredicted RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 TLCD1Q96CP7 247 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 STN1Q9H668 368 aaKnown RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 TOR4AQ9NXH8 423 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 MLXQ9UH92 298 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 FAM135BQ49AJ0 1406 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 TRIM43BA6NCK2 446 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 PLOD2O00469 737 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ITM2AO43736 263 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 GRIN3BO60391 1043 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ZBTB48P10074 688 aaPredicted RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 RRM1P23921 792 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 GRK3P35626 688 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 SLC25A3Q00325 362 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 MCL1Q07820 350 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 C6orf52Q5T4I8 152 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 NDUFAF5Q5TEU4 345 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ZNF677Q86XU0 584 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 MYO1HQ8N1T3 1032 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 FAM13CQ8NE31 585 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 ZBBXA8MT70 800 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CHP2O43745 196 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 RBP1P09455 135 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 NEK3P51956 506 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 PKNOX1P55347 436 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CARTPTQ16568 116 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 CCNG2Q16589 344 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 TMEM119Q4V9L6 283 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 KHDRBS2Q5VWX1 349 aaKnown RBP3.15□□□□□ -1.9
NEB-220ENST00000618972 FBXO11Q86XK2 927 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 FAM86C1Q9NVL1 165 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 HSFX1Q9UBD0 423 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 EMSYQ7Z589 1322 aa3.15□□□□□ -1.9
NEB-220ENST00000618972 A6NHS1 94 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 LRRIQ4A6NIV6 560 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 STX16-NPEPL1H3BU86 382 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 SESN2P58004 480 aaPredicted RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 HSF2Q03933 536 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 RHOT1Q8IXI2 618 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 KRT78Q8N1N4 520 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 DNAAF3Q8N9W5 541 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 ZNF518BQ9C0D4 1074 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 NCOR1P1Q9H4R4 102 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 SYNDIG1Q9H7V2 258 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 PTPRHQ9HD43 1115 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 CPA4Q9UI42 421 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 ASTN2O75129 1339 aaPredicted RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 PDXKO00764 312 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 MAGEA10P43363 369 aaPredicted RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 ALDH9A1P49189 494 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 SAMD4BQ5PRF9 694 aaKnown RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 TTYH3Q9C0H2 523 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 RNPEPL1Q9HAU8 725 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 ASNSD1Q9NWL6 643 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 ADRB2P07550 413 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 ATF6P18850 670 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 OGNP20774 298 aaKnown RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 VWA5B1Q5TIE3 1220 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 SAPCD2Q86UD0 394 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 GUF1Q8N442 669 aaKnown RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 CKAP2Q8WWK9 683 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 NT5C1BQ96P26 610 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 ERMAPQ96PL5 475 aaPredicted RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 NUP85Q9BW27 656 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 CHID1Q9BWS9 393 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 RNPEPQ9H4A4 650 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 GGA1Q9UJY5 639 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 HES2Q9Y543 173 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 ITIH6Q6UXX5 1313 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 K7ERI5 159 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 DSG3P32926 999 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 AP3S2P59780 193 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 ZNF543Q08ER8 600 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 MSLNQ13421 630 aaPredicted RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 SRPK1Q96SB4 655 aaKnown RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 TARS2Q9BW92 718 aaKnown RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 DNAJC18Q9H819 358 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 EYA4O95677 639 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 SSTR1P30872 391 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 CDH15P55291 814 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 IFRD2Q12894 506 aaPredicted RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 USP10Q14694 798 aaKnown RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 MYBPC3Q14896 1274 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 KYAT3Q6YP21 454 aaKnown RBP3.15□□□□□ -1.91
NEB-220ENST00000618972 TMPRSS4Q9NRS4 437 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 PCDHB12Q9Y5F1 795 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 KDM3AQ9Y4C1 1321 aa3.15□□□□□ -1.91
NEB-220ENST00000618972 C3orf70A6NLC5 250 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms