RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 LCN1P1Q5VSP4 162 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 CDK20Q8IZL9 346 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 ACTRT2Q8TDY3 377 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 BARX2Q9UMQ3 279 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 H0YIN7 160 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 SDC2P34741 201 aa15.36■□□□□ 0.05
COL5A1-208ENST00000618395 SKIV2LQ15477 1246 aaKnown RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 MARCH10Q8NA82 808 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-208ENST00000618395 MAP2P11137 1827 aaKnown RBP15.35■□□□□ 0.05
COL5A1-208ENST00000618395 CHKAP35790 457 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 PRKAA1Q13131 559 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 METTL16Q86W50 562 aaKnown RBP15.35■□□□□ 0.05
COL5A1-208ENST00000618395 SPPL2AQ8TCT8 520 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 BLOC1S5Q8TDH9 187 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 FBXO40Q9UH90 709 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 RBM47A0AV96 593 aaKnown RBP15.35■□□□□ 0.05
COL5A1-208ENST00000618395 RLN1P04808 185 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 SSTP61278 116 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 CARTPTQ16568 116 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 PTRHD1Q6GMV3 140 aaKnown RBP15.35■□□□□ 0.05
COL5A1-208ENST00000618395 PAGR1Q9BTK6 254 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 TCEA3O75764 348 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 RALAP11233 206 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 PDHA2P29803 388 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 PDK1Q15118 436 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 VPS72Q15906 364 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF655Q8N720 491 aaPredicted RBP15.35■□□□□ 0.05
COL5A1-208ENST00000618395 CCDC167Q9P0B6 97 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 SLC16A3O15427 465 aaKnown RBP15.35■□□□□ 0.05
COL5A1-208ENST00000618395 HNF4AP41235 474 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 AP1S1P61966 158 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 GTF2IP78347 998 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 TFDP3Q5H9I0 405 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 PPM1LQ5SGD2 360 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 SLC44A2Q8IWA5 706 aaPredicted RBP15.35■□□□□ 0.05
COL5A1-208ENST00000618395 AADATQ8N5Z0 425 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 FAM71DQ8N9W8 422 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 TNFAIP8L1Q8WVP5 186 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 GRHL1Q9NZI5 618 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 DGKBQ9Y6T7 804 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 MYL4P12829 197 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 FDFT1P37268 417 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 ACCSLQ4AC99 568 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 THEM5Q8N1Q8 247 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF669Q96BR6 464 aaPredicted RBP15.35■□□□□ 0.05
COL5A1-208ENST00000618395 HGH1Q9BTY7 390 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 FADS3Q9Y5Q0 445 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 PLEKHG1Q9ULL1 1385 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 CYP26A1O43174 497 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 MAGP20916 626 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 HSD17B12Q53GQ0 312 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 ELMOD2Q8IZ81 293 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 VMP1Q96GC9 406 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF408Q9H9D4 720 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 WDR41Q9HAD4 459 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 ZSWIM5Q9P217 1185 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 IKZF3Q9UKT9 509 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 CENPBD1B2RD01 187 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 TMEM132CQ8N3T6 1108 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 GPRASP2Q96D09 838 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 SIK3Q9Y2K2 1263 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 RPS6KL1Q9Y6S9 549 aa15.35■□□□□ 0.05
COL5A1-208ENST00000618395 E7ENX8 843 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 NFICP08651 508 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 GRIK3Q13003 919 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 MTM1Q13496 603 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 TCEAL3Q969E4 200 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 COPS4Q9BT78 406 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 SH3BP1Q9Y3L3 701 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 CCDC88CQ9P219 2028 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 OPLAHO14841 1288 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 CPA3P15088 417 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 GRIA3P42263 894 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 CTSWP56202 376 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 GMPPBQ9Y5P6 360 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 KCNK1O00180 336 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 SERPINE1P05121 402 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 ALDH1B1P30837 517 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 CIR1Q86X95 450 aaPredicted RBP15.34■□□□□ 0.05
COL5A1-208ENST00000618395 ZNF398Q8TD17 642 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 DMRTB1Q96MA1 342 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 PRDM5Q9NQX1 630 aaPredicted RBP15.34■□□□□ 0.05
COL5A1-208ENST00000618395 WWOXQ9NZC7 414 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 PRAMEF33A0A0G2JMD5 474 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 RIPK2O43353 540 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 PRAMEF10O60809 474 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 GABBR2O75899 941 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 AVPR1AP37288 418 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 IDH2P48735 452 aaKnown RBP15.34■□□□□ 0.05
COL5A1-208ENST00000618395 NT5C2P49902 561 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 PLCL1Q15111 1095 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 SLFN13Q68D06 897 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 HAGHLQ6PII5 290 aaPredicted RBP15.34■□□□□ 0.05
COL5A1-208ENST00000618395 CRISPLD1Q9H336 500 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 GPC3P51654 580 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 GNG2P59768 71 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
COL5A1-208ENST00000618395 MCPH1Q8NEM0 835 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms