RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RTP3Q9BQQ7 232 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 PLAC1Q9HBJ0 212 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 UBP1Q9NZI7 540 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 DCTN4Q9UJW0 460 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 SMG5Q9UPR3 1016 aaKnown RBP12.8□□□□□ -0.36
CIITA-212ENST00000618207 GIT1Q9Y2X7 761 aa12.8□□□□□ -0.36
CIITA-212ENST00000618207 TDRD15B5MCY1 1934 aaKnown RBP12.79□□□□□ -0.36
CIITA-212ENST00000618207 E2F8A0AVK6 867 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 PRPF4O43172 522 aaKnown RBP eCLIP12.79□□□□□ -0.36
CIITA-212ENST00000618207 IGHA2P01877 340 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 CSH1P0DML2 217 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 CSH2P0DML3 217 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 ITGA7Q13683 1181 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 TBC1D1Q86TI0 1168 aaPredicted RBP12.79□□□□□ -0.36
CIITA-212ENST00000618207 SCN4BQ8IWT1 228 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 FITM2Q8N6M3 262 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 PGBD4Q96DM1 585 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 RTP4Q96DX8 246 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 TKTL2Q9H0I9 626 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 KLHL14Q9P2G3 628 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 PRG3Q9Y2Y8 225 aaPredicted RBP12.79□□□□□ -0.36
CIITA-212ENST00000618207 IQANK1A0A1B0GTG1 560 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 TMEM88BA6NKF7 163 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 PPP1R12AO14974 1030 aaPredicted RBP12.79□□□□□ -0.36
CIITA-212ENST00000618207 KPNA6O60684 536 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 MGAT1P26572 445 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 NR2C2P49116 596 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 MGAT3Q09327 533 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 ITIH4Q14624 930 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 RWDD4Q6NW29 188 aaKnown RBP12.79□□□□□ -0.36
CIITA-212ENST00000618207 CDHR3Q6ZTQ4 885 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 KIF2BQ8N4N8 673 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 MZB1Q8WU39 189 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 SLC44A1Q8WWI5 657 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 SMARCD1Q96GM5 515 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 WDCPQ9H6R7 721 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 WDR6Q9NNW5 1121 aaKnown RBP12.79□□□□□ -0.36
CIITA-212ENST00000618207 CYLDQ9NQC7 956 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 SENP1Q9P0U3 644 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 KLHL8Q9P2G9 620 aaPredicted RBP12.79□□□□□ -0.36
CIITA-212ENST00000618207 TRIM33Q9UPN9 1127 aa12.79□□□□□ -0.36
CIITA-212ENST00000618207 A0A0A0MRY4 1105 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 B4GALT3O60512 393 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 GCATO75600 419 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 ODC1P11926 461 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 CALRP27797 417 aaKnown RBP12.78□□□□□ -0.36
CIITA-212ENST00000618207 PCSK1P29120 753 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 EPHB2P29323 1055 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 PGFP49763 221 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 MTFR1Q15390 333 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 OVOS1Q6IE37 1185 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 CCDC91Q7Z6B0 441 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 ZNF280BQ86YH2 543 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 NPWQ8N729 165 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 USP33Q8TEY7 942 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 KCTD13Q8WZ19 329 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 ZNF75CPQ92670 426 aaPredicted RBP12.78□□□□□ -0.36
CIITA-212ENST00000618207 PTPRN2Q92932 1015 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 SIGLEC10Q96LC7 697 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 SPATA13Q96N96 652 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 MECRQ9BV79 373 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 NPHS2Q9NP85 383 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 CHST12Q9NRB3 414 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 CDH9Q9ULB4 789 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 ARL2BPQ9Y2Y0 163 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 SMAPO00193 183 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 MSI1O43347 362 aaKnown RBP12.78□□□□□ -0.36
CIITA-212ENST00000618207 APOEP02649 317 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 PPP2R5DQ14738 602 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 SMYD5Q6GMV2 418 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 ECHDC2Q86YB7 292 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 ZNF567Q8N184 647 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 TMEM86AQ8N2M4 240 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 DHRS4Q9BTZ2 278 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 COLEC11Q9BWP8 271 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 IQCGQ9H095 443 aaKnown RBP12.78□□□□□ -0.36
CIITA-212ENST00000618207 KDM4CQ9H3R0 1056 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 SLC40A1Q9NP59 571 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 SFMBT1Q9UHJ3 866 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 TLL2Q9Y6L7 1015 aa12.78□□□□□ -0.36
CIITA-212ENST00000618207 ATXN2Q99700 1313 aaKnown RBP12.78□□□□□ -0.36
CIITA-212ENST00000618207 A0A0U1RQF3 1178 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 CCDC195A0A1B0GUA6 201 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 DGKIO75912 1065 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 MOCS2O96007 188 aaPredicted RBP12.77□□□□□ -0.36
CIITA-212ENST00000618207 OAS1P00973 400 aaKnown RBP12.77□□□□□ -0.36
CIITA-212ENST00000618207 GMPRP36959 345 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 SCNN1AP37088 669 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 GRIK1P39086 918 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 PDK4Q16654 411 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 SLC26A11Q86WA9 606 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 BANPQ8N9N5 519 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 GPR152Q8TDT2 470 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 NT5C3BQ969T7 300 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 OLFM3Q96PB7 478 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 SLC2A13Q96QE2 648 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 PCMTD2Q9NV79 361 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms