RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MAP3K6O95382 1288 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 MAPKAPK2P49137 400 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ADCY7P51828 1080 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SSTP61278 116 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ATP6V0D1P61421 351 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 TRIM32Q13049 653 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SLC30A10Q6XR72 485 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 RHOT1Q8IXI2 618 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 JPH3Q8WXH2 748 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 BBS4Q96RK4 519 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 FAM8A1Q9UBU6 413 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PRPF19Q9UMS4 504 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 RTCBQ9Y3I0 505 aaKnown RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PRDX6P30041 224 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 HOXD11P31277 338 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CAPGP40121 348 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 CYP2J2P51589 502 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 PRKCEQ02156 737 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 INSCQ1MX18 579 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 C6orf52Q5T4I8 152 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF425Q6IV72 752 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 FOXR2Q6PJQ5 311 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 SETDB2Q96T68 719 aa5.07□□□□□ -1.6
VPS13D-213ENST00000613099 NRXN1Q9ULB1 1477 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PLK4O00444 970 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TIE1P35590 1138 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PON2Q15165 354 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF284Q2VY69 593 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TRIM72Q6ZMU5 477 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DYMQ7RTS9 669 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TP63Q9H3D4 680 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MCUBQ9NWR8 336 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PIK3C2BO00750 1634 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MAGEB6P1A0A0J9YX57 407 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DYRK3O43781 588 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PRKCBP05771 671 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 RARBP10826 455 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZYG11AQ6WRX3 759 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 LURAP1Q96LR2 239 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF317Q96PQ6 595 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 RTKNQ9BST9 563 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PRMT3O60678 531 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DNAJB5O75953 348 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SRP72O76094 671 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ARCQ7LC44 396 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PDSS2Q86YH6 399 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SLC13A5Q86YT5 568 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 COLGALT2Q8IYK4 626 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 KAT6AQ92794 2004 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF416Q9BWM5 594 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CELF4Q9BZC1 486 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TRMT13Q9NUP7 481 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MRPS7Q9Y2R9 242 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 GDAQ9Y2T3 454 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 MICAL3Q7RTP6 2002 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 UGT2B4P06133 528 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PDHA2P29803 388 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SOX11P35716 441 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF211Q13398 564 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SMCO1Q147U7 214 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 VWA5B1Q5TIE3 1220 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PIGUQ9H490 435 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 P4HBP07237 508 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PDGFRBP09619 1106 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DLATP10515 647 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CDK4P11802 303 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TCEA1P23193 301 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 EIF3EP60228 445 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DDR2Q16832 855 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 NAALADL2Q58DX5 795 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 Q6ZNX1 250 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TRPV1Q8NER1 839 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DDX43Q9NXZ2 648 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PMF1-BGLAPU3KQ54 211 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SGTAO43765 313 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DFNA5O60443 496 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PEX11AO75192 247 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CABP4P57796 275 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CHRNDQ07001 517 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CDC16Q13042 620 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TFDP2Q14188 446 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 IL23RQ5VWK5 629 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DNAJC24Q6P3W2 148 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ZDHHC13Q8IUH4 622 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 DHX38Q92620 1227 aaKnown RBP5.06□□□□□ -1.6
VPS13D-213ENST00000613099 NT5C1BQ96P26 610 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 C7orf25Q9BPX7 421 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 KCTD5Q9NXV2 234 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 VPS51Q9UID3 782 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 VAV3Q9UKW4 847 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CAPN8A6NHC0 703 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 PROCP04070 461 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 TSPAN19P0C672 248 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 CYP2D6P10635 497 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 IFI30P13284 250 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 AKR1B1P15121 316 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 FOSL2P15408 326 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 ALDH1B1P30837 517 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 SLC18A1P54219 525 aa5.06□□□□□ -1.6
VPS13D-213ENST00000613099 EPHA7Q15375 998 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms