RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 MAF1Q9H063 256 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 MYLK2Q9H1R3 596 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 DPEP3Q9H4B8 488 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 ZDHHC18Q9NUE0 388 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 RRN3Q9NYV6 651 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 HACD1B0YJ81 288 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 GNGT2O14610 69 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 VAPBO95292 243 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 BRCC3P46736 316 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 NOMO1Q15155 1222 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 FAM83EQ2M2I3 478 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 CPT1BQ92523 772 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 PRCCQ92733 491 aaPredicted RBP13.49□□□□□ -0.25
TCF3-220ENST00000611869 PPP1R2P1Q96PQ5 205 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 SLC8A2Q9UPR5 921 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 L3MBTL1Q9Y468 752 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 ACTL7BQ9Y614 415 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 SLC30A1Q9Y6M5 507 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 COL1A2P08123 1366 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 PGAM1P18669 254 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 KCNA3P22001 575 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 ARHGAP1Q07960 439 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 NBPF20Q3BBV1 942 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 TIGD7Q6NT04 549 aaPredicted RBP13.49□□□□□ -0.25
TCF3-220ENST00000611869 KCNMB4Q86W47 210 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 STKLD1Q8NE28 680 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 LRRC39Q96DD0 335 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 LPIN3Q9BQK8 851 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 ACOT9Q9Y305 439 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 GLI3P10071 1580 aa13.49□□□□□ -0.25
TCF3-220ENST00000611869 E9PBE3 544 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 F5H5T6 163 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 GSTA4O15217 222 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 KLHL41O60662 606 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 ALDH1A3P47895 512 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 MRPS5P82675 430 aaKnown RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 CRELD2Q6UXH1 353 aaPredicted RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 PTAR1Q7Z6K3 402 aaPredicted RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 PLD5Q8N7P1 536 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 APBA2Q99767 749 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 CDYLQ9Y232 598 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 A0A096LPK6 155 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 FCHO1O14526 889 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 SUPT7LO94864 414 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 ALDH2P05091 517 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 COPAP53621 1224 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 POLE2P56282 527 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 CYP1B1Q16678 543 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 LAYNQ6UX15 382 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 FUKQ8N0W3 1084 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 TMEM169Q96HH4 297 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 SHOX2O60902 331 aaPredicted RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 TBX4P57082 545 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 CSHL1Q14406 222 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 PCBP1Q15365 356 aaKnown RBP eCLIP13.48□□□□□ -0.251e-7■■■■□ 20.4
TCF3-220ENST00000611869 PARP6Q2NL67 630 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 TEX9Q8N6V9 391 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 FGD4Q96M96 766 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 PCYT2Q99447 389 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 DUSP16Q9BY84 665 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 SRRM3A6NNA2 597 aaPredicted RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 TRDMT1O14717 391 aaKnown RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 FSBPO95073 299 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 RPLP2P05387 115 aaKnown RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 SOX11P35716 441 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 SLC11A2P49281 568 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 ENPEPQ07075 957 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 RBBP7Q16576 425 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 ZRANB3Q5FWF4 1079 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 LRRC8EQ6NSJ5 796 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 MYLPFQ96A32 169 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 DDX50Q9BQ39 737 aaKnown RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 CINPQ9BW66 212 aaPredicted RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 EFR3BQ9Y2G0 817 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 PCDHB5Q9Y5E4 795 aa13.48□□□□□ -0.25
TCF3-220ENST00000611869 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.48□□□□□ -0.25
TCF3-220ENST00000611869 SERPINB5P36952 375 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 NRLP54845 237 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 RCN1Q15293 331 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 DEFB128Q7Z7B8 93 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 ANKRD23Q86SG2 305 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 FAM35AQ86V20 835 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 DDX1Q92499 740 aaKnown RBP13.47□□□□□ -0.25
TCF3-220ENST00000611869 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
TCF3-220ENST00000611869 LRP5O75197 1615 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.47□□□□□ -0.25
TCF3-220ENST00000611869 SUPT3HB4E1H0 165 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 SUPT3HO75486 399 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 RHOBTB1O94844 696 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 CHRM3P20309 590 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 LMO2P25791 158 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 GDF10P55107 478 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 ZNF177Q13360 481 aaPredicted RBP13.47□□□□□ -0.25
TCF3-220ENST00000611869 IMPG1Q17R60 797 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 SDHAF4Q5VUM1 108 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
TCF3-220ENST00000611869 XPO1O14980 1071 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms