RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ACAD11Q709F0 780 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 PEX26Q7Z412 305 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 MMAAQ8IVH4 418 aaKnown RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 KSR1Q8IVT5 923 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 OR6P1Q8NGX9 317 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 STMN2Q93045 179 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 TLCD1Q96CP7 247 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 SUSD3Q96L08 255 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 NUP88Q99567 741 aaPredicted RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 ZKSCAN3Q9BRR0 538 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 PI4K2AQ9BTU6 479 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 TBC1D10AQ9BXI6 508 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 COL25A1Q9BXS0 654 aaPredicted RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 RBCK1Q9BYM8 510 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 WDR12Q9GZL7 423 aaKnown RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 RNF38Q9H0F5 515 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 CCDC134Q9H6E4 229 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 MARCH7Q9H992 704 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 NEK6Q9HC98 313 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 MRPL47Q9HD33 250 aaKnown RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 STRN4Q9NRL3 753 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 RBM12Q9NTZ6 932 aaKnown RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 SMARCAL1Q9NZC9 954 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 UVRAGQ9P2Y5 699 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF212Q9UDV6 495 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 VPS51Q9UID3 782 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 MBD1Q9UIS9 605 aaPredicted RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 VAV3Q9UKW4 847 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 SRPK3Q9UPE1 567 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 HYOU1Q9Y4L1 999 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 PCDHB12Q9Y5F1 795 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 PCDHGC4Q9Y5F7 938 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 ZFP37Q9Y6Q3 630 aaPredicted RBP4.87□□□□□ -1.63
LINC01109-201ENST00000603837 C1orf167Q5SNV9 1468 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 RREB1Q92766 1687 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 MYH2Q9UKX2 1941 aa4.87□□□□□ -1.63
LINC01109-201ENST00000603837 DCDC2BA2VCK2 349 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 GSAPA4D1B5 854 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 OR6C74A6NCV1 312 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 DDX3XO00571 662 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 NPC1O15118 1278 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 LILRB5O75023 590 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 TRMUO75648 421 aaKnown RBP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 PGM3O95394 542 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 TFPTP0C1Z6 253 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF12P17014 697 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 PRKAR1BP31321 381 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 GMPRP36959 345 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 PBX1P40424 430 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 SYKP43405 635 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 TM4SF4P48230 202 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 KRT6CP48668 564 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 CASP9P55211 416 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 RPP38P78345 283 aaKnown RBP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 PPP2R2BQ00005 443 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 GFPT1Q06210 699 aaPredicted RBP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 SLC14A1Q13336 389 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 DGKZQ13574 1117 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF460Q14592 562 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 EFTUD2Q15029 972 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 PCBP1Q15365 356 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 UAP1Q16222 522 aaPredicted RBP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 SUPT20HL1Q3ZLR7 823 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 CCDC58Q4VC31 144 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 BTBD8Q5XKL5 378 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 THAP5Q7Z6K1 395 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 CDH26Q8IXH8 852 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 SYCE1Q8N0S2 351 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 OR56B2PQ8NGI1 322 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 ANKS1AQ92625 1134 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 CDKL2Q92772 493 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 NINJ1Q92982 152 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 TUBGCP3Q96CW5 907 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 ARL5BQ96KC2 179 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 FBXL18Q96ME1 805 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 DHRS9Q9BPW9 319 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 TRIM62Q9BVG3 475 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 MTFR1LQ9H019 292 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 PAIP1Q9H074 479 aaKnown RBP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 IL20Q9NYY1 176 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 KLK14Q9P0G3 267 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 DNAJB9Q9UBS3 223 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 PRKAG3Q9UGI9 489 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 RPS6KA6Q9UK32 745 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 VPS28Q9UK41 221 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 TFR2Q9UP52 801 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 MRPL11Q9Y3B7 192 aaKnown RBP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 LMO7Q8WWI1 1683 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 MYO3BQ8WXR4 1341 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 A0A1W2PPL8 197 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 PGPEP1LA6NFU8 196 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 GOLGA8RI6L899 631 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 AP3D1O14617 1153 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 TLR3O15455 904 aaKnown RBP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 POLR2DO15514 142 aaKnown RBP4.86□□□□□ -1.63
LINC01109-201ENST00000603837 BNIP3LO60238 219 aa4.86□□□□□ -1.63
LINC01109-201ENST00000603837 ZNF862O60290 1169 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms