RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SUZ12Q15022 739 aaKnown RBP10.41□□□□□ -0.74
LIG1-209ENST00000596104 TEAD4Q15561 434 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 SMAD1Q15797 465 aaKnown RBP10.41□□□□□ -0.74
LIG1-209ENST00000596104 ZCWPW2Q504Y3 356 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 FNDC3BQ53EP0 1204 aaKnown RBP10.41□□□□□ -0.74
LIG1-209ENST00000596104 KCNT1Q5JUK3 1230 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 ATL3Q6DD88 541 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 CHST9Q7L1S5 443 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 FMNL3Q8IVF7 1028 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 ANKRD52Q8NB46 1076 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 LRIG1Q96JA1 1093 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 DNAI2Q9GZS0 605 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 BTBD1Q9H0C5 482 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 MMRN2Q9H8L6 949 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 FBRSQ9HAH7 460 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 PRSS16Q9NQE7 514 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 CISHQ9NSE2 258 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 ABCB8Q9NUT2 735 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 HBS1LQ9Y450 684 aaKnown RBP10.41□□□□□ -0.74
LIG1-209ENST00000596104 LOC400499M0QZD8 3231 aa10.41□□□□□ -0.74
LIG1-209ENST00000596104 KNL1Q8NG31 2342 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 RHOBTB3O94955 611 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 LATS1O95835 1130 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 IGHV4-34P06331 123 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 DLDP09622 509 aaKnown RBP10.4□□□□□ -0.74
LIG1-209ENST00000596104 PABPC1P11940 636 aaKnown RBP10.4□□□□□ -0.74
LIG1-209ENST00000596104 KRT13P13646 458 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 PFKFB1P16118 471 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 GTF2H1P32780 548 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 PSMC2P35998 433 aaKnown RBP10.4□□□□□ -0.74
LIG1-209ENST00000596104 HARS2P49590 506 aaKnown RBP10.4□□□□□ -0.74
LIG1-209ENST00000596104 SGSHP51688 502 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 ZNF445P59923 1031 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 ADGRF1Q5T601 910 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 KRT39Q6A163 491 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 SCUBE3Q8IX30 993 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 TTC39CQ8N584 583 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 CCDC150Q8NCX0 1101 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 WFDC5Q8TCV5 224 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 TMA16Q96EY4 203 aaKnown RBP10.4□□□□□ -0.74
LIG1-209ENST00000596104 CRELD1Q96HD1 420 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 SGK2Q9HBY8 427 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 OLA1Q9NTK5 396 aaKnown RBP10.4□□□□□ -0.74
LIG1-209ENST00000596104 SFMBT1Q9UHJ3 866 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 USP25Q9UHP3 1055 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 GGA2Q9UJY4 613 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 PLA2G4CQ9UP65 541 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 MAPK8IP1Q9UQF2 711 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 HPSEQ9Y251 543 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 CELSR3Q9NYQ7 3312 aa10.4□□□□□ -0.74
LIG1-209ENST00000596104 CKAP5Q14008 2032 aa10.4□□□□□ -0.75
LIG1-209ENST00000596104 A0A1B0GTQ1 180 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 A0A1B0GVL5 298 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 YJEFN3A6XGL0 299 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 C10orf142B7Z368 130 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 E7ENQ6 273 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 XPO1O14980 1071 aaKnown RBP10.39□□□□□ -0.75
LIG1-209ENST00000596104 MSI1O43347 362 aaKnown RBP10.39□□□□□ -0.75
LIG1-209ENST00000596104 FSBPO95073 299 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 DNTTP04053 509 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 PRR29P0C7W0 189 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 CMA1P23946 247 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 MXI1P50539 228 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 BCAT1P54687 386 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 DNM1Q05193 864 aaKnown RBP10.39□□□□□ -0.75
LIG1-209ENST00000596104 PKP1Q13835 747 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 GOLGA7BQ2TAP0 167 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 BSPRYQ5W0U4 402 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 MBLAC2Q68D91 279 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 DHRS13Q6UX07 377 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 AHI1Q8N157 1196 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 GUF1Q8N442 669 aaKnown RBP10.39□□□□□ -0.75
LIG1-209ENST00000596104 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
LIG1-209ENST00000596104 FBXL13Q8NEE6 735 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 EDEM1Q92611 657 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 TATDN2Q93075 761 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 MYO19Q96H55 970 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 LMLNQ96KR4 655 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 MTG2Q9H4K7 406 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 LRRC4Q9HBW1 653 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 RAB20Q9NX57 234 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 TSPAN16Q9UKR8 245 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 CFAP45Q9UL16 551 aa10.39□□□□□ -0.75
LIG1-209ENST00000596104 SMG1Q96Q15 3661 aaKnown RBP10.39□□□□□ -0.75
LIG1-209ENST00000596104 URB1O60287 2271 aaKnown RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 CABIN1Q9Y6J0 2220 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 E9PAM4 449 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 VILLO15195 856 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 GABBR2O75899 941 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 IGLV3-27P01718 113 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 ATP5BP06576 529 aaKnown RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 RPL13P26373 211 aaKnown RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 CD70P32970 193 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 SLC8A3P57103 927 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 RACK1P63244 317 aaKnown RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 IL9RQ01113 521 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 ADIGQ0VDE8 80 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 BST2Q10589 180 aaKnown RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 DPYDQ12882 1025 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 ADAM9Q13443 819 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms