RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SCNN1AP37088 669 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 ZNF445P59923 1031 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 ARID5AQ03989 594 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 PTP4A2Q12974 167 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 NR1I3Q14994 352 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 HSF5Q4G112 596 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 PREPLQ4J6C6 727 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 MPPE1Q53F39 396 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 E4F1Q66K89 784 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 TMEM215Q68D42 235 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 RASSF3Q86WH2 238 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 ERICH1Q86X53 443 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 ZDHHC17Q8IUH5 632 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 NT5C3BQ969T7 300 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 NPY6RQ99463 290 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 SYT11Q9BT88 431 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 FAM204AQ9H8W3 233 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 DDIT4Q9NX09 232 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 SMG5Q9UPR3 1016 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 NUMA1Q14980 2115 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 SYNJ2BP-COX16A0A087WUM0 186 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 A0A1W2PQF6 199 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 I6L893 689 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 APBB3O95704 486 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 MMP8P22894 467 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 NOS2P35228 1153 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 FLT3P36888 993 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 PBX1P40424 430 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 MATKP42679 507 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 WASP42768 502 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC11A2P49281 568 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 SNX16P57768 344 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 RPS24P62847 133 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 CDK17Q00537 523 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 FANCCQ00597 558 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 CENPCQ03188 943 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 MS4A13Q5J8X5 152 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 FAM102AQ5T9C2 384 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 MMS22LQ6ZRQ5 1243 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 IRF2BP2Q7Z5L9 587 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 MDGA1Q8NFP4 955 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 TSTD1Q8NFU3 115 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC30A5Q8TAD4 765 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 LMLNQ96KR4 655 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 PRMT1Q99873 361 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC2A11Q9BYW1 496 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 ANLNQ9NQW6 1124 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 PIGVQ9NUD9 493 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 COX16Q9P0S2 106 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 EBF1Q9UH73 591 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 TMEM59LQ9UK28 342 aa11.4□□□□□ -0.58
SHKBP1-206ENST00000595523 LRRC53A6NM62 1247 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 WASH3PC4AMC7 463 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 GOLGA8SH3BPF8 625 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 AXIN1O15169 862 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 TBL1XO60907 577 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 CAVIN2O95810 425 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 SERPINC1P01008 464 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 APOEP02649 317 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 NTSR1P30989 418 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 CD70P32970 193 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 CNR2P34972 360 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 DGKEP52429 567 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 RNASE9P60153 205 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 NME3Q13232 169 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 ENPP2Q13822 863 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 LPAL2Q16609 132 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 CLEC16AQ2KHT3 1053 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 FILIP1LQ4L180 1135 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 EOGTQ5NDL2 527 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 MPP7Q5T2T1 576 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 RAP1GAP2Q684P5 730 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 ANO7Q6IWH7 933 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 KIAA1211LQ6NV74 962 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 TRIM72Q6ZMU5 477 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 CACNA2D4Q7Z3S7 1137 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 BNIPLQ7Z465 357 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 ANKS1BQ7Z6G8 1248 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 KIAA0907Q7Z7F0 614 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 ADIPOR2Q86V24 386 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 CFAP52Q8N1V2 620 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 GAB3Q8WWW8 586 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 SORCS1Q8WY21 1168 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 BTN2A3PQ96KV6 586 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 GABRG3Q99928 467 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 AGPAT1Q99943 283 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 C11orf70Q9BRQ4 267 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 IRX2Q9BZI1 471 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 TPSD1Q9BZJ3 242 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 CACNA2D2Q9NY47 1150 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 MYO6Q9UM54 1294 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 CACNA1AO00555 2505 aa11.39□□□□□ -0.59
SHKBP1-206ENST00000595523 TCRBV21S2A2A0A5A6 115 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 M0QYT0 321 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 RPP40O75818 363 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms