RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 HECTD3Q5T447 861 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 TMEM150AQ86TG1 271 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 ALLCQ8N6M5 410 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 MICAL1Q8TDZ2 1067 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 ZNF334Q9HCZ1 680 aaPredicted RBP21.5■■□□□ 1.03
PNKP-203ENST00000593946 DNMT3LQ9UJW3 386 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 HEY1Q9Y5J3 304 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 SNX10Q9Y5X0 201 aa21.5■■□□□ 1.03
PNKP-203ENST00000593946 DCLK1O15075 740 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 LRIG2O94898 1065 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 LRG1P02750 347 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 RBP3P10745 1247 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 ATP5C1P36542 298 aaKnown RBP21.49■■□□□ 1.03
PNKP-203ENST00000593946 NR2C2P49116 596 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 KPNA1P52294 538 aaPredicted RBP21.49■■□□□ 1.03
PNKP-203ENST00000593946 DDX42Q86XP3 938 aaKnown RBP eCLIP21.49■■□□□ 1.03
PNKP-203ENST00000593946 GSPT2Q8IYD1 628 aaKnown RBP21.49■■□□□ 1.03
PNKP-203ENST00000593946 IFT81Q8WYA0 676 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 TMEM121Q9BTD3 319 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 PBX4Q9BYU1 374 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 TRIM31Q9BZY9 425 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 DPH5Q9H2P9 285 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 IL21Q9HBE4 155 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 FAM114A2Q9NRY5 505 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 XPO7Q9UIA9 1087 aaKnown RBP21.49■■□□□ 1.03
PNKP-203ENST00000593946 NEU3Q9UQ49 428 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 HBS1LQ9Y450 684 aaKnown RBP21.49■■□□□ 1.03
PNKP-203ENST00000593946 MFHAS1Q9Y4C4 1052 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 SLC12A8A0AV02 714 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 APOEP02649 317 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 F11P03951 625 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 HTR7P34969 479 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 GGCXP38435 758 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 NRG1Q02297 640 aaPredicted RBP21.49■■□□□ 1.03
PNKP-203ENST00000593946 GBE1Q04446 702 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 SLC10A2Q12908 348 aaPredicted RBP21.49■■□□□ 1.03
PNKP-203ENST00000593946 GPM6BQ13491 265 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 MAP9Q49MG5 647 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 ARTNQ5T4W7 220 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 MANEALQ5VSG8 457 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 PDE12Q6L8Q7 609 aaKnown RBP21.49■■□□□ 1.03
PNKP-203ENST00000593946 RTL10Q7L3V2 364 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 SIK2Q9H0K1 926 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 NFU1Q9UMS0 254 aa21.49■■□□□ 1.03
PNKP-203ENST00000593946 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.48■■□□□ 1.03
PNKP-203ENST00000593946 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.48■■□□□ 1.03
PNKP-203ENST00000593946 COCHO43405 550 aa21.48■■□□□ 1.03
PNKP-203ENST00000593946 MOCS2O96007 188 aaPredicted RBP21.48■■□□□ 1.03
PNKP-203ENST00000593946 OAS1P00973 400 aaKnown RBP21.48■■□□□ 1.03
PNKP-203ENST00000593946 ERCC2P18074 760 aa21.48■■□□□ 1.03
PNKP-203ENST00000593946 ECHS1P30084 290 aa21.48■■□□□ 1.03
PNKP-203ENST00000593946 RPL21P46778 160 aaKnown RBP21.48■■□□□ 1.03
PNKP-203ENST00000593946 PAFAH1B3Q15102 231 aaKnown RBP21.48■■□□□ 1.03
PNKP-203ENST00000593946 BEND6Q5SZJ8 279 aaPredicted RBP21.48■■□□□ 1.03
PNKP-203ENST00000593946 GSTA5Q7RTV2 222 aa21.48■■□□□ 1.03
PNKP-203ENST00000593946 AENQ8WTP8 325 aaKnown RBP21.48■■□□□ 1.03
PNKP-203ENST00000593946 C1orf74Q96LT6 269 aa21.48■■□□□ 1.03
PNKP-203ENST00000593946 ARFGAP3Q9NP61 516 aa21.48■■□□□ 1.03
PNKP-203ENST00000593946 DTLQ9NZJ0 730 aa21.48■■□□□ 1.03
PNKP-203ENST00000593946 HS3ST4Q9Y661 456 aa21.48■■□□□ 1.03
PNKP-203ENST00000593946 MFSD11O43934 449 aa21.47■■□□□ 1.03
PNKP-203ENST00000593946 HOXC13P31276 330 aa21.47■■□□□ 1.03
PNKP-203ENST00000593946 PIK3R6Q5UE93 754 aa21.47■■□□□ 1.03
PNKP-203ENST00000593946 ZC3H18Q86VM9 953 aaKnown RBP21.47■■□□□ 1.03
PNKP-203ENST00000593946 TMC8Q8IU68 726 aa21.47■■□□□ 1.03
PNKP-203ENST00000593946 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.47■■□□□ 1.03
PNKP-203ENST00000593946 BTN2A3PQ96KV6 586 aa21.47■■□□□ 1.03
PNKP-203ENST00000593946 OLFM3Q96PB7 478 aa21.47■■□□□ 1.03
PNKP-203ENST00000593946 LRRC3Q9BY71 257 aa21.47■■□□□ 1.03
PNKP-203ENST00000593946 SNX24Q9Y343 169 aa21.47■■□□□ 1.03
PNKP-203ENST00000593946 SGK1O00141 431 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 KRT14P02533 472 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 IVDP26440 423 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 EPHB2P29323 1055 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 MLLT6P55198 1093 aaPredicted RBP21.46■■□□□ 1.03
PNKP-203ENST00000593946 XRCC4Q13426 336 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 PABPC1LQ4VXU2 614 aaKnown RBP21.46■■□□□ 1.03
PNKP-203ENST00000593946 TMCO3Q6UWJ1 677 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 ATP6V0D2Q8N8Y2 350 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 CCDC89Q8N998 374 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 GLIS1Q8NBF1 620 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 C10orf88Q9H8K7 445 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 GRHL1Q9NZI5 618 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 ASIC3Q9UHC3 531 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 TNRC18O15417 2968 aaPredicted RBP21.46■■□□□ 1.03
PNKP-203ENST00000593946 C2orf78A6NCI8 922 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 H7C0C1 242 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 CLASP2O75122 1294 aaKnown RBP21.46■■□□□ 1.03
PNKP-203ENST00000593946 MAP3K6O95382 1288 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 ATP5OP48047 213 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 MTA1Q13330 715 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 HLTFQ14527 1009 aaKnown RBP eCLIP21.46■■□□□ 1.03
PNKP-203ENST00000593946 TRIP13Q15645 432 aaPredicted RBP21.46■■□□□ 1.03
PNKP-203ENST00000593946 NUGGCQ68CJ6 796 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 DARS2Q6PI48 645 aaKnown RBP21.46■■□□□ 1.03
PNKP-203ENST00000593946 BZW1Q7L1Q6 419 aaKnown RBP21.46■■□□□ 1.03
PNKP-203ENST00000593946 ELMOD1Q8N336 334 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 CCHCR1Q8TD31 782 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 NACA2Q9H009 215 aa21.46■■□□□ 1.03
PNKP-203ENST00000593946 PCDH9Q9HC56 1237 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms