RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 METTL12A8MUP2 240 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 GJB3O75712 270 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 ATP5BP06576 529 aaKnown RBP19.65■□□□□ 0.74
CCDC43-205ENST00000592333 EPHX1P07099 455 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 HLA-FP30511 346 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 RPL34P49207 117 aaKnown RBP19.65■□□□□ 0.74
CCDC43-205ENST00000592333 LRMPQ12912 555 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 FOXC1Q12948 553 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 NNTQ13423 1086 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 PMF1Q6P1K2 205 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 KDF1Q8NAX2 398 aaPredicted RBP19.65■□□□□ 0.74
CCDC43-205ENST00000592333 OR2T3Q8NH03 318 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 TFAP2BQ92481 460 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 NDRG1Q92597 394 aaKnown RBP19.65■□□□□ 0.74
CCDC43-205ENST00000592333 DDX50Q9BQ39 737 aaKnown RBP19.65■□□□□ 0.74
CCDC43-205ENST00000592333 ADAM33Q9BZ11 813 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 SLC6A17Q9H1V8 727 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 MAN1B1Q9UKM7 699 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 CNTN6Q9UQ52 1028 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 NEUROG3Q9Y4Z2 214 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 CACNA1EQ15878 2313 aa19.65■□□□□ 0.74
CCDC43-205ENST00000592333 LTFP02788 710 aa19.64■□□□□ 0.73
CCDC43-205ENST00000592333 ZNF883P0CG24 379 aa19.64■□□□□ 0.73
CCDC43-205ENST00000592333 LCP1P13796 627 aa19.64■□□□□ 0.73
CCDC43-205ENST00000592333 IL27RAQ6UWB1 636 aa19.64■□□□□ 0.73
CCDC43-205ENST00000592333 UNQ6494/PRO21346Q6UXR6 183 aa19.64■□□□□ 0.73
CCDC43-205ENST00000592333 EHBP1Q8NDI1 1231 aa19.64■□□□□ 0.73
CCDC43-205ENST00000592333 STK32AQ8WU08 396 aa19.64■□□□□ 0.73
CCDC43-205ENST00000592333 FAM81BQ96LP2 452 aa19.64■□□□□ 0.73
CCDC43-205ENST00000592333 FAM221BA6H8Z2 402 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 MEI4A8MW99 385 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 KCNJ18B7U540 433 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 PPP1R3GB7ZBB8 358 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 M0QYV0 167 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 FGFR1OPO95684 399 aaKnown RBP19.63■□□□□ 0.73
CCDC43-205ENST00000592333 DLDP09622 509 aaKnown RBP19.63■□□□□ 0.73
CCDC43-205ENST00000592333 PABPC1P11940 636 aaKnown RBP19.63■□□□□ 0.73
CCDC43-205ENST00000592333 CD59P13987 128 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 CD44P16070 742 aaKnown RBP19.63■□□□□ 0.73
CCDC43-205ENST00000592333 PRKCHP24723 683 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 ACADSBP45954 432 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 MORC3Q14149 939 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 ZNF423Q2M1K9 1284 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 PIK3R6Q5UE93 754 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 ADIPOR2Q86V24 386 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 TRIM59Q8IWR1 403 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 KDM1BQ8NB78 822 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 ERCC4Q92889 916 aaPredicted RBP19.63■□□□□ 0.73
CCDC43-205ENST00000592333 SERPINB11Q96P15 392 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 GPR174Q9BXC1 333 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 OSGEPQ9NPF4 335 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 CD93Q9NPY3 652 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 SUN2Q9UH99 717 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 GGA2Q9UJY4 613 aa19.63■□□□□ 0.73
CCDC43-205ENST00000592333 TYW5A2RUC4 315 aaKnown RBP19.62■□□□□ 0.73
CCDC43-205ENST00000592333 RNF225M0QZC1 329 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-205ENST00000592333 ACSL4O60488 711 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 GABBR2O75899 941 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 SIM1P81133 766 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-205ENST00000592333 CHST9Q7L1S5 443 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 ENOSF1Q7L5Y1 443 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 FIBINQ8TAL6 211 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 NELFBQ8WX92 580 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 ZSWIM1Q9BR11 485 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 SCNM1Q9BWG6 230 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 TMEM121BQ9BXQ6 578 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-205ENST00000592333 ABCB8Q9NUT2 735 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 SCML1Q9UN30 329 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 TLR6Q9Y2C9 796 aa19.62■□□□□ 0.73
CCDC43-205ENST00000592333 BCAT2O15382 392 aaPredicted RBP19.61■□□□□ 0.73
CCDC43-205ENST00000592333 MSI1O43347 362 aaKnown RBP19.61■□□□□ 0.73
CCDC43-205ENST00000592333 MED7O43513 233 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 TSPAN3O60637 253 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 POLR2EP19388 210 aaKnown RBP19.61■□□□□ 0.73
CCDC43-205ENST00000592333 BMP6P22004 513 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 GPD2P43304 727 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 TBX4P57082 545 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 KCNH2Q12809 1159 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 ARID5BQ14865 1188 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 PTPRNQ16849 979 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 FNDC3BQ53EP0 1204 aaKnown RBP19.61■□□□□ 0.73
CCDC43-205ENST00000592333 DCAF12L1Q5VU92 463 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 SORCS1Q8WY21 1168 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 LHX5Q9H2C1 402 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 MSRB2Q9Y3D2 182 aa19.61■□□□□ 0.73
CCDC43-205ENST00000592333 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCDC43-205ENST00000592333 AFPP02771 609 aaKnown RBP19.6■□□□□ 0.73
CCDC43-205ENST00000592333 ASLP04424 464 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 BRD2P25440 801 aaKnown RBP19.6■□□□□ 0.73
CCDC43-205ENST00000592333 RGS7P49802 495 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 SFSWAPQ12872 951 aaKnown RBP19.6■□□□□ 0.73
CCDC43-205ENST00000592333 GRIK2Q13002 908 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 PAK1Q13153 545 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 FAM133BQ5BKY9 247 aaKnown RBP19.6■□□□□ 0.73
CCDC43-205ENST00000592333 MBLAC2Q68D91 279 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 CCDC117Q8IWD4 279 aaPredicted RBP19.6■□□□□ 0.73
CCDC43-205ENST00000592333 HJURPQ8NCD3 748 aaPredicted RBP19.6■□□□□ 0.73
CCDC43-205ENST00000592333 C1orf216Q8TAB5 229 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 GATA6Q92908 595 aa19.6■□□□□ 0.73
CCDC43-205ENST00000592333 TTC17Q96AE7 1141 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms