RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 TRUB2O95900 331 aaKnown RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 C1RP00736 705 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 UQCRHP07919 91 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 PDGFRAP16234 1089 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 TFE3P19532 575 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 MIPP30301 263 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 PTPN7P35236 360 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 MATKP42679 507 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 CDR1P51861 262 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 HDAC4P56524 1084 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 SLC8A3P57103 927 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 YWHAZP63104 245 aaKnown RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 TUBB4BP68371 445 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 HYAL1Q12794 435 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 KLF1Q13351 362 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 ZNF211Q13398 564 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 CYP1B1Q16678 543 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 DUSP6Q16828 381 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 ERCC6LQ2NKX8 1250 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 C15orf59Q2T9L4 293 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 TCEAL5Q5H9L2 206 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 KIAA1841Q6NSI8 718 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 PRSS55Q6UWB4 352 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 SLC13A5Q86YT5 568 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 SPATA2LQ8IUW3 424 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 TTC9BQ8N6N2 239 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 ATAD1Q8NBU5 361 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 MNS1Q8NEH6 495 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 MICAL1Q8TDZ2 1067 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 C2orf15Q8WU43 125 aaKnown RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 EDARADDQ8WWZ3 215 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 RIN2Q8WYP3 895 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 PGAP3Q96FM1 320 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 KLHL5Q96PQ7 755 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 CDCA3Q99618 268 aaPredicted RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 LRRC4Q9HBW1 653 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 CD320Q9NPF0 282 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.17□□□□□ -1.1
SDF2-210ENST00000592250 RBM12Q9NTZ6 932 aaKnown RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 KLF15Q9UIH9 416 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 PCDHB5Q9Y5E4 795 aa8.17□□□□□ -1.1
SDF2-210ENST00000592250 ZNF638Q14966 1978 aaKnown RBP8.17□□□□□ -1.1
SDF2-210ENST00000592250 TCRBV7S2A1N4TA0A589 114 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 WDR27A2RRH5 827 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 PER2O15055 1255 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 CLASP2O75122 1294 aaKnown RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 GLP2RO95838 553 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 ZBED1O96006 694 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 IGLV3-25P01717 112 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 HAPLN1P10915 354 aaPredicted RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 RPL17P18621 184 aaKnown RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 PAFAH1B1P43034 410 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 PGFP49763 221 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 DNA2P51530 1060 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 CLCN4P51793 760 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 RNASE9P60153 205 aaKnown RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 PITX1P78337 314 aaPredicted RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 ROR1Q01973 937 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 CREMQ03060 361 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 RAB33AQ14088 237 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 PSMD5Q16401 504 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SLC25A52Q3SY17 297 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 ARTNQ5T4W7 220 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SYPL2Q5VXT5 272 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 LILRA6Q6PI73 481 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 TMEM184AQ6ZMB5 413 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 EP400NLQ6ZTU2 488 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 STRADAQ7RTN6 431 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SCD5Q86SK9 330 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 RBM23Q86U06 439 aaKnown RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 RCOR2Q8IZ40 523 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 DEFB106AQ8N104 65 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 GOLGA6L1Q8N7Z2 621 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 PRELID2Q8N945 189 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 VN1R2Q8NFZ6 395 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SCAMP5Q8TAC9 235 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SPPL2BQ8TCT7 592 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SLC22A17Q8WUG5 538 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 TEKT4Q8WW24 435 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 RAPGEF5Q92565 580 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SPATA17Q96L03 361 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 CEP295NLQ96MC4 621 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 CFAP57Q96MR6 1250 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 SLITRK1Q96PX8 696 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 TBCBQ99426 244 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 NCAPGQ9BPX3 1015 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 EMILIN2Q9BXX0 1053 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 ANKZF1Q9H8Y5 726 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 COMMD8Q9NX08 183 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 DDX56Q9NY93 547 aaKnown RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.16□□□□□ -1.1
SDF2-210ENST00000592250 MARK1Q9P0L2 795 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 HSFX1Q9UBD0 423 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 USP18Q9UMW8 372 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 NOVA2Q9UNW9 492 aaKnown RBP8.16□□□□□ -1.1
SDF2-210ENST00000592250 SCML2Q9UQR0 700 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 USTQ9Y2C2 406 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 EFR3BQ9Y2G0 817 aa8.16□□□□□ -1.1
SDF2-210ENST00000592250 HCFC2Q9Y5Z7 792 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms