RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 FANCCQ00597 558 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 NME3Q13232 169 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 SRSF5Q13243 272 aaKnown RBP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 CRY1Q16526 586 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 GEN1Q17RS7 908 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 EOGTQ5NDL2 527 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 MPP7Q5T2T1 576 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 EGFLAMQ63HQ2 1017 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 TMEM92Q6UXU6 159 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 TRIM72Q6ZMU5 477 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 TSTD1Q8NFU3 115 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 SLC30A5Q8TAD4 765 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 BAP1Q92560 729 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 RNF34Q969K3 372 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 BTN2A3PQ96KV6 586 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 PCDHB18PQ96TA0 734 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 DDX50Q9BQ39 737 aaKnown RBP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 IRX2Q9BZI1 471 aaPredicted RBP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 NUCKS1Q9H1E3 243 aaKnown RBP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 FAM204AQ9H8W3 233 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 RRN3Q9NYV6 651 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 COX16Q9P0S2 106 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 EBF1Q9UH73 591 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 SLC12A6Q9UHW9 1150 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 XPO7Q9UIA9 1087 aaKnown RBP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 MYO6Q9UM54 1294 aa9.54□□□□□ -0.88
DNMT1-223ENST00000591239 PTPRZ1P23471 2315 aaPredicted RBP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 MYO18AQ92614 2054 aaKnown RBP9.54□□□□□ -0.88
DNMT1-223ENST00000591239 EP300Q09472 2414 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 KCNU1A8MYU2 1149 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 GOLGA8SH3BPF8 625 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 M0QYT0 321 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 AXIN1O15169 862 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 TIMM44O43615 452 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 TBL1XO60907 577 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 CCDC172P0C7W6 258 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 UNGP13051 313 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 HNRNPLP14866 589 aaKnown RBP eCLIP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 FERP16591 822 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 TFE3P19532 575 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 ABCB4P21439 1286 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 HLA-FP30511 346 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 UBASH3AP57075 661 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 RPS24P62847 133 aaKnown RBP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 SIM2Q14190 667 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 CLEC16AQ2KHT3 1053 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 MS4A13Q5J8X5 152 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 TMEM215Q68D42 235 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 RNF43Q68DV7 783 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 SDE2Q6IQ49 451 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 MMS22LQ6ZRQ5 1243 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 IRF2BP2Q7Z5L9 587 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 ANKS1BQ7Z6G8 1248 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 CHPFQ8IZ52 775 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 ATP6V0D2Q8N8Y2 350 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 NT5C3BQ969T7 300 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 MYEOVQ96EZ4 313 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 PRICKLE1Q96MT3 831 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 ACOX2Q99424 681 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 NPY6RQ99463 290 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 AGPAT1Q99943 283 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 ADAM33Q9BZ11 813 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 POLMQ9NP87 494 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 ABCB8Q9NUT2 735 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 ELOVL2Q9NXB9 296 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 CALCOCO1Q9P1Z2 691 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 STIM2Q9P246 746 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 TMEM59LQ9UK28 342 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 RAB23Q9ULC3 237 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 SMG5Q9UPR3 1016 aaKnown RBP9.53□□□□□ -0.88
DNMT1-223ENST00000591239 GPR179Q6PRD1 2367 aa9.53□□□□□ -0.88
DNMT1-223ENST00000591239 FAM186AA6NE01 2351 aa9.52□□□□□ -0.88
DNMT1-223ENST00000591239 TYW5A2RUC4 315 aaKnown RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 LRRC53A6NM62 1247 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 RPP40O75818 363 aaKnown RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 ALDH1A2O94788 518 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 HOXB2P14652 356 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 TACR2P21452 398 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 FLT3P36888 993 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 WASP42768 502 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 NSFP46459 744 aaKnown RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 CENPCQ03188 943 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 PTP4A2Q12974 167 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 MTA1Q13330 715 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 EIF4HQ15056 248 aaKnown RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 NFKBIBQ15653 356 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 LPAL2Q16609 132 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 SLC25A52Q3SY17 297 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 OTUD1Q5VV17 481 aaPredicted RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 RAP1GAP2Q684P5 730 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 ANO7Q6IWH7 933 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 PRR23BQ6ZRT6 265 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 CEP68Q76N32 757 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 ARCQ7LC44 396 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 KIAA0907Q7Z7F0 614 aaPredicted RBP9.52□□□□□ -0.89
DNMT1-223ENST00000591239 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
DNMT1-223ENST00000591239 CHSY1Q86X52 802 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms