RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	VPS50	Q96JG6	964 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	LBHD1	Q9BQE6	289 aa	Predicted RBP	5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	ELOVL1	Q9BW60	279 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	GHITM	Q9H3K2	345 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	BRF2	Q9HAW0	419 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	PDE11A	Q9HCR9	933 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	ANKEF1	Q9NU02	776 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	TMEM74B	Q9NUR3	256 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	TMLHE	Q9NVH6	421 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	HAUS2	Q9NVX0	235 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	CNOT7	Q9UIV1	285 aa	Known RBP	5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	CCNL1	Q9UK58	526 aa	Predicted RBP	5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	PIAS3	Q9Y6X2	628 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	ADGRA2	Q96PE1	1338 aa		5.43	□□□□□ -1.54
ATP9B-223	ENST00000590608	KRTAP23-1	A1A580	65 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608		A8MVJ9	347 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	PRAMEF2	O60811	474 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	PTP4A3	O75365	173 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	KAT7	O95251	611 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	ADRA1D	P25100	572 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	CTGF	P29279	349 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	IGHMBP2	P38935	993 aa	Known RBP	5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	SEC23B	Q15437	767 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	CCNG2	Q16589	344 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	FAM187B	Q17R55	369 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	ZNF585A	Q6P3V2	769 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	ACSM6	Q6P461	480 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	ATF7IP	Q6VMQ6	1270 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	RINL	Q6ZS11	566 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	GALNT5	Q7Z7M9	940 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	DIS3L2	Q8IYB7	885 aa	Known RBP	5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	TTC9B	Q8N6N2	239 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	MAFA	Q8NHW3	353 aa	Predicted RBP	5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	OVCA2	Q8WZ82	227 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	KCNJ9	Q92806	393 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	RNFT2	Q96EX2	444 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	MASTL	Q96GX5	879 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	PPP1R10	Q96QC0	940 aa	Known RBP	5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	KLC2	Q9H0B6	622 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	SERHL2	Q9H4I8	314 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	PCDHB16	Q9NRJ7	776 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	SMPD4	Q9NXE4	827 aa		5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.42	□□□□□ -1.54
ATP9B-223	ENST00000590608	GAGE12B	A1L429	117 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	GAGE12H	A6NDE8	117 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	SH2D7	A6NKC9	451 aa	Predicted RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	HNRNPR	O43390	633 aa	Known RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	TMCC2	O75069	709 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	TMEM63A	O94886	807 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	CD72	P21854	359 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	CHM	P24386	653 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	EPHA8	P29322	1005 aa	Predicted RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	ACTN2	P35609	894 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	KRT20	P35900	424 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	NAP1L1	P55209	391 aa	Known RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	ARF3	P61204	181 aa	Predicted RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	ARF1	P84077	181 aa	Known RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	PSG6	Q00889	435 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	ITIH3	Q06033	890 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	CDK18	Q07002	472 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	DCTN2	Q13561	401 aa	Known RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	THOC5	Q13769	683 aa	Known RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	CBFB	Q13951	182 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	PRICKLE4	Q2TBC4	344 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	RUNDC3A	Q59EK9	446 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	DENND1B	Q6P3S1	775 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	PXK	Q7Z7A4	578 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	NGEF	Q8N5V2	710 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	ZMIZ2	Q8NF64	920 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	METTL6	Q8TCB7	284 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	CREB3L4	Q8TEY5	395 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	C8orf49	Q96NF6	230 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	TREX2	Q9BQ50	279 aa	Predicted RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	ITPA	Q9BY32	194 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	TAOK3	Q9H2K8	898 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	CDCP1	Q9H5V8	836 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	USP29	Q9HBJ7	922 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	TRIM36	Q9NQ86	728 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	THAP1	Q9NVV9	213 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	ST6GALNAC2	Q9UJ37	374 aa		5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	COPG1	Q9Y678	874 aa	Known RBP	5.41	□□□□□ -1.54
ATP9B-223	ENST00000590608	FAM90A7P	A6NKC0	464 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	FAM90A22P	A8MWA6	464 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	FAM90A12P	A8MX19	464 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	FAM90A23P	A8MXZ1	464 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	AP3D1	O14617	1153 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	GJB3	O75712	270 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	MLYCD	O95822	493 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	MBP	P02686	304 aa	Predicted RBP	5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	TMIGD3	P0DMS9	266 aa	Predicted RBP	5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	ZNF37A	P17032	561 aa	Predicted RBP	5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	RPS6KB1	P23443	525 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	FPR3	P25089	353 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	AVPR2	P30518	371 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	GALNS	P34059	522 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	PCP4	P48539	62 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	SUMO2	P61956	95 aa	Known RBP	5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	SLC25A3	Q00325	362 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	DNASE1L3	Q13609	305 aa		5.4	□□□□□ -1.54
ATP9B-223	ENST00000590608	NAA25	Q14CX7	972 aa		5.4	□□□□□ -1.54

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