RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 INHBCP55103 352 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 DAB2P98082 770 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 FOXD4L6Q3SYB3 417 aaPredicted RBP6.41□□□□□ -1.38
VPS25-204ENST00000589577 NCEH1Q6PIU2 408 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 SERPINA13PQ6UXR4 307 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 FOXD4L3Q6VB84 417 aaPredicted RBP6.41□□□□□ -1.38
VPS25-204ENST00000589577 TMC6Q7Z403 805 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 TOP6BLQ8N6T0 577 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 LRRC52Q8N7C0 313 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 KRI1Q8N9T8 703 aaKnown RBP6.41□□□□□ -1.38
VPS25-204ENST00000589577 PDZD8Q8NEN9 1154 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 OR4C6Q8NH72 309 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 MYCBPAPQ8TBZ2 947 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 OVCA2Q8WZ82 227 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 FBXO32Q969P5 355 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 MIB2Q96AX9 1013 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 MMTAG2Q9BU76 263 aaKnown RBP6.41□□□□□ -1.38
VPS25-204ENST00000589577 ZNF518BQ9C0D4 1074 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 OSBPL2Q9H1P3 480 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 SGK2Q9HBY8 427 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 ELOVL2Q9NXB9 296 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 IL37Q9NZH6 218 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 EHD2Q9NZN4 543 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 CDH9Q9ULB4 789 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 PCDHGA4Q9Y5G9 962 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 RP1L1Q8IWN7 2480 aaPredicted RBP6.41□□□□□ -1.38
VPS25-204ENST00000589577 SDK2Q58EX2 2172 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 FAM92AA1XBS5 289 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 FAM47DPA6NHR8 397 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 CLDN5O00501 218 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 SPTLC2O15270 562 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 TLR5O60602 858 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 RTN2O75298 545 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 TNFSF15O95150 251 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 GJB6O95452 261 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 KLKB1P03952 638 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 GP1BAP07359 652 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 ITGA2BP08514 1039 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 PDGFRBP09619 1106 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 COL8A1P27658 744 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 GRNP28799 593 aaKnown RBP6.4□□□□□ -1.38
VPS25-204ENST00000589577 DCTP40126 519 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 UQCRFS1P47985 274 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 ME1P48163 572 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 CD97P48960 835 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 SMTNP53814 917 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 CEBPZQ03701 1054 aaKnown RBP6.4□□□□□ -1.38
VPS25-204ENST00000589577 DNM1Q05193 864 aaKnown RBP6.4□□□□□ -1.38
VPS25-204ENST00000589577 ZBTB16Q05516 673 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 NCAPHQ15003 741 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 EIF4HQ15056 248 aaKnown RBP6.4□□□□□ -1.38
VPS25-204ENST00000589577 ZNF174Q15697 407 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 MDH1BQ5I0G3 518 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 ARL6IP4Q66PJ3 421 aaKnown RBP6.4□□□□□ -1.38
VPS25-204ENST00000589577 DTHD1Q6ZMT9 781 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 ANKS1BQ7Z6G8 1248 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 ZC3H3Q8IXZ2 948 aaKnown RBP6.4□□□□□ -1.38
VPS25-204ENST00000589577 C4orf32Q8N8J7 132 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 IGSF22Q8N9C0 903 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 ZSWIM2Q8NEG5 633 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 SNX29Q8TEQ0 813 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 CDK5RAP3Q96JB5 506 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 FIZ1Q96SL8 496 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 KCNK16Q96T55 309 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 TIPINQ9BVW5 301 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 CIPCQ9C0C6 399 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 DPEP3Q9H4B8 488 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 PRSS16Q9NQE7 514 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 OSER1Q9NX31 292 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 DNM3Q9UQ16 869 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 STYXL1Q9Y6J8 313 aa6.4□□□□□ -1.38
VPS25-204ENST00000589577 ZNF106Q9H2Y7 1883 aaKnown RBP6.4□□□□□ -1.39
VPS25-204ENST00000589577 MED13LQ71F56 2210 aa6.4□□□□□ -1.39
VPS25-204ENST00000589577 TACC2O95359 2948 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 A1L4Q6 167 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 MDM4O15151 490 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 FFAR2O15552 330 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 LATO43561 262 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 DNTTP04053 509 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 THEGLP0DJG4 465 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 WARSP23381 471 aaKnown RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 DGKAP23743 735 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 DDIT3P35638 169 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 PRPHP41219 470 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 MLLT3P42568 568 aaPredicted RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 SLC5A3P53794 718 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 SLC12A3P55017 1021 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 PPP2CBP62714 309 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 PPP2CAP67775 309 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 TFAMQ00059 246 aaKnown RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 EHHADHQ08426 723 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 PKP1Q13835 747 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 MAPRE1Q15691 268 aaKnown RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 TTC31Q49AM3 519 aaPredicted RBP6.39□□□□□ -1.39
VPS25-204ENST00000589577 ARSHQ5FYA8 562 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 ADALQ6DHV7 355 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 FOXR1Q6PIV2 292 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 CCDC73Q6ZRK6 1079 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 USP30Q70CQ3 517 aa6.39□□□□□ -1.39
VPS25-204ENST00000589577 VASH2Q86V25 355 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms