RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 HEY1Q9Y5J3 304 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 RAD54BQ9Y620 910 aa12.48□□□□□ -0.41
CCBE1-203ENST00000589116 HACD1B0YJ81 288 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 I6L893 689 aaPredicted RBP12.47□□□□□ -0.41
CCBE1-203ENST00000589116 SMAPO00193 183 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 TP73O15350 636 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 FGF18O76093 207 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 IFNB1P01574 187 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 CSH1P0DML2 217 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 CSH2P0DML3 217 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 RARGP13631 454 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 AMPD1P23109 780 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 PGFP49763 221 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 ITGA8P53708 1063 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 NRG1Q02297 640 aaPredicted RBP12.47□□□□□ -0.41
CCBE1-203ENST00000589116 MTA1Q13330 715 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 SLMAPQ14BN4 828 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 PAFAH1B3Q15102 231 aaKnown RBP12.47□□□□□ -0.41
CCBE1-203ENST00000589116 P3H1Q32P28 736 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 IZUMO3Q5VZ72 239 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 PDZD4Q76G19 769 aaPredicted RBP12.47□□□□□ -0.41
CCBE1-203ENST00000589116 PCGF5Q86SE9 256 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 TADA2BQ86TJ2 420 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 ZC3H18Q86VM9 953 aaKnown RBP12.47□□□□□ -0.41
CCBE1-203ENST00000589116 HERC6Q8IVU3 1022 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 KRT222Q8N1A0 295 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 TSEN2Q8NCE0 465 aaKnown RBP12.47□□□□□ -0.41
CCBE1-203ENST00000589116 STKLD1Q8NE28 680 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 GPR152Q8TDT2 470 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 OLFM3Q96PB7 478 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 C1QTNF1Q9BXJ1 281 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 MAGEB5Q9BZ81 275 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 TXLNGYQ9BZA5 131 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 RXFP1Q9HBX9 757 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 TMPRSS4Q9NRS4 437 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 OR12D3Q9UGF7 316 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 ANAPC5Q9UJX4 755 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 SLC4A7Q9Y6M7 1214 aa12.47□□□□□ -0.41
CCBE1-203ENST00000589116 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 GOLGA6BA6NDN3 693 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 DCLK1O15075 740 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 CTSAP10619 480 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 VPS41P49754 854 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 GDF10P55107 478 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 GBE1Q04446 702 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 DHX9Q08211 1270 aaKnown RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 GPS1Q13098 491 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 VEPH1Q14D04 833 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 MORF4L2Q15014 288 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 KCTD19Q17RG1 926 aaPredicted RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 SLC45A4Q5BKX6 768 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 C9orf50Q5SZB4 431 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 ACBD5Q5T8D3 534 aaPredicted RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 SNX30Q5VWJ9 437 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 HIBCHQ6NVY1 386 aaPredicted RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 C4orf22Q6V702 233 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 UNC45BQ8IWX7 931 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 GLIS1Q8NBF1 620 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 ATXN2LQ8WWM7 1075 aaKnown RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 TRMT2BQ96GJ1 504 aaKnown RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 SLC39A13Q96H72 371 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 PKNOX2Q96KN3 472 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 QKIQ96PU8 341 aaKnown RBP eCLIP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 MED4Q9NPJ6 270 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 DTLQ9NZJ0 730 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 CXXC1Q9P0U4 656 aaPredicted RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 SFMBT1Q9UHJ3 866 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 TPX2Q9ULW0 747 aaKnown RBP12.46□□□□□ -0.41
CCBE1-203ENST00000589116 SHOC2Q9UQ13 582 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 RWDD3Q9Y3V2 267 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 YIPF1Q9Y548 306 aa12.46□□□□□ -0.41
CCBE1-203ENST00000589116 KCNU1A8MYU2 1149 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 FAM72CH0Y354 149 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 MSI1O43347 362 aaKnown RBP12.45□□□□□ -0.42
CCBE1-203ENST00000589116 MFSD11O43934 449 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 LILRB3O75022 631 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 SEC24AO95486 1093 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 ATP2A2P16615 1042 aaKnown RBP12.45□□□□□ -0.42
CCBE1-203ENST00000589116 ERCC2P18074 760 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 HOXC13P31276 330 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 ELF1P32519 619 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 SERPINB6P35237 376 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 ACTN2P35609 894 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 ALDH1A3P47895 512 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 KPNA1P52294 538 aaPredicted RBP12.45□□□□□ -0.42
CCBE1-203ENST00000589116 TBX4P57082 545 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 PDK1Q15118 436 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 TRIP4Q15650 581 aaPredicted RBP12.45□□□□□ -0.42
CCBE1-203ENST00000589116 CFAP58Q5T655 872 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 FAM72AQ5TYM5 149 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 FAM72DQ6L9T8 149 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 HOOK3Q86VS8 718 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 FAM72BQ86X60 149 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 TCEAL8Q8IYN2 117 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 FAM71DQ8N9W8 422 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 GIPC2Q8TF65 315 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 MYRFLQ96LU7 910 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 RUFY1Q96T51 708 aa12.45□□□□□ -0.42
CCBE1-203ENST00000589116 FERMT1Q9BQL6 677 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms