RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 SIN3BO75182 1162 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 CDH8P55286 799 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 SLC6A3Q01959 620 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 STILQ15468 1287 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 C15orf59Q2T9L4 293 aaPredicted RBP13.82□□□□□ -0.2
KDM4B-208ENST00000589104 PMF1Q6P1K2 205 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 TMEM135Q86UB9 458 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 PALM2Q8IXS6 379 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 BTBD9Q96Q07 612 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 TRIM56Q9BRZ2 755 aaKnown RBP13.82□□□□□ -0.2
KDM4B-208ENST00000589104 DTLQ9NZJ0 730 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 IGSF9Q9P2J2 1179 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 WISP3O95389 354 aaPredicted RBP13.82□□□□□ -0.2
KDM4B-208ENST00000589104 CXCL8P10145 99 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 LSAMPQ13449 338 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 KYAT1Q16773 422 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 PACS1Q6VY07 963 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 PIWIL2Q8TC59 973 aaKnown RBP13.82□□□□□ -0.2
KDM4B-208ENST00000589104 XAB2Q9HCS7 855 aaKnown RBP13.82□□□□□ -0.2
KDM4B-208ENST00000589104 PREBQ9HCU5 417 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 ADAM28Q9UKQ2 775 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 SOX13Q9UN79 622 aa13.82□□□□□ -0.2
KDM4B-208ENST00000589104 KRT37O76014 449 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 APBA3O96018 575 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 DEUP1Q05D60 604 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 THOC5Q13769 683 aaKnown RBP13.81□□□□□ -0.2
KDM4B-208ENST00000589104 BBS9Q3SYG4 887 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 FAM160B1Q5W0V3 765 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 HACE1Q8IYU2 909 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 KCTD15Q96SI1 283 aaPredicted RBP13.81□□□□□ -0.2
KDM4B-208ENST00000589104 GALNT8Q9NY28 637 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 HOXC10Q9NYD6 342 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 ZC3H7BQ9UGR2 993 aaKnown RBP13.81□□□□□ -0.2
KDM4B-208ENST00000589104 CNOT11Q9UKZ1 510 aaKnown RBP13.81□□□□□ -0.2
KDM4B-208ENST00000589104 PCDHB12Q9Y5F1 795 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 ZCWPW2A0A1B0GU75 182 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 COPEO14579 308 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 TOP3BO95985 862 aaKnown RBP13.81□□□□□ -0.2
KDM4B-208ENST00000589104 PGM1P36871 562 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 HK2P52789 917 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 SFT2D3Q587I9 215 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 MARCH8Q5T0T0 291 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 DPY19L2Q6NUT2 758 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 DHDDSQ86SQ9 333 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 RFX6Q8HWS3 928 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 KBTBD7Q8WVZ9 684 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 GCOM2Q9BZD3 368 aaPredicted RBP13.81□□□□□ -0.2
KDM4B-208ENST00000589104 PLK2Q9NYY3 685 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 RIMS3Q9UJD0 308 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 FZD10Q9ULW2 581 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 TRIM64BA6NI03 449 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 IMPDH2P12268 514 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 MAGEA8P43361 318 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 CACNA2D1P54289 1103 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 DSG1Q02413 1049 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 RFTN1Q14699 578 aaPredicted RBP13.81□□□□□ -0.2
KDM4B-208ENST00000589104 SH2D4BQ5SQS7 431 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 METTL21CQ5VZV1 264 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 BORAQ6PGQ7 559 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 CCNJLQ8IV13 435 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 IRGQQ8WZA9 623 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 JADE3Q92613 823 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 PPP2R3CQ969Q6 453 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 ANKRD36BP1Q96IX9 119 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 UHRF1Q96T88 793 aaPredicted RBP13.81□□□□□ -0.2
KDM4B-208ENST00000589104 CXCL16Q9H2A7 254 aa13.81□□□□□ -0.2
KDM4B-208ENST00000589104 ZNF106Q9H2Y7 1883 aaKnown RBP13.8□□□□□ -0.2
KDM4B-208ENST00000589104 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
KDM4B-208ENST00000589104 APOL1O14791 398 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 ZBTB14O43829 449 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 PFDN1O60925 122 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 SKIP12755 728 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 CD1EP15812 388 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 GRIA1P42261 906 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 AQP5P55064 265 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 CHI3L2Q15782 390 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 HSDL1Q3SXM5 330 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
KDM4B-208ENST00000589104 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 CNTN4Q8IWV2 1026 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 NIM1KQ8IY84 436 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 CRYBG2Q8N1P7 616 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 CLPTM1LQ96KA5 538 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 CSPG4P5Q96PW8 444 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 TCEAL9Q9UHQ7 104 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 CHD5Q8TDI0 1954 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 DCLK1O15075 740 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 HMGCS2P54868 508 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 SCAPQ12770 1279 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 ITGA7Q13683 1181 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 UBAP2LQ14157 1087 aaKnown RBP13.8□□□□□ -0.2
KDM4B-208ENST00000589104 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 BHLHA9Q7RTU4 235 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 PDGFDQ9GZP0 370 aaPredicted RBP13.8□□□□□ -0.2
KDM4B-208ENST00000589104 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 ANGPTL2Q9UKU9 493 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 TMEM114B3SHH9 223 aa13.8□□□□□ -0.2
KDM4B-208ENST00000589104 ZNF189O75820 626 aaPredicted RBP13.8□□□□□ -0.2
KDM4B-208ENST00000589104 PENKP01210 267 aaPredicted RBP13.8□□□□□ -0.2
KDM4B-208ENST00000589104 INHBAP08476 426 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms