RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 BTBD8Q5XKL5 378 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 FUT10Q6P4F1 479 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 RFX8Q6ZV50 586 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 RELL1Q8IUW5 271 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 ANKMY2Q8IV38 441 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 LRRC43Q8N309 656 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 ARFGAP2Q8N6H7 521 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 NAT8LQ8N9F0 302 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 DQX1Q8TE96 717 aaKnown RBP9.06□□□□□ -0.96
SMAD4-206ENST00000588860 DIS3LQ8TF46 1054 aaKnown RBP9.06□□□□□ -0.96
SMAD4-206ENST00000588860 TLCD1Q96CP7 247 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 RTP4Q96DX8 246 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 PGAP3Q96FM1 320 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-206ENST00000588860 PKNOX2Q96KN3 472 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 TTC25Q96NG3 672 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 SLC9A7Q96T83 725 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 CAPS2Q9BXY5 557 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 GPR62Q9BZJ7 368 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-206ENST00000588860 STMN4Q9H169 189 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-206ENST00000588860 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-206ENST00000588860 FBXW11Q9UKB1 542 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 ATP11BQ9Y2G3 1177 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 SNX10Q9Y5X0 201 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.06□□□□□ -0.96
SMAD4-206ENST00000588860 COL4A6Q14031 1691 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 OBSL1O75147 1896 aa9.06□□□□□ -0.96
SMAD4-206ENST00000588860 A0A087WUV0 522 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-206ENST00000588860 A0A1W2PQH9 124 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 HACD1B0YJ81 288 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 NT5C1B-RDH14C9J2C7 533 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 H7C4K7 107 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 SMAPO00193 183 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 CHADO15335 359 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 SHOX2O60902 331 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-206ENST00000588860 BANF1O75531 89 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 DGKIO75912 1065 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 TMEM63AO94886 807 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 UPP2O95045 317 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 GALTP07902 379 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 ABHD2P08910 425 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 CPB1P15086 417 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 VAV1P15498 845 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 PBX3P40426 434 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 PPP2R2AP63151 447 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 DMTNQ08495 405 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 ELAVL2Q12926 359 aaKnown RBP9.05□□□□□ -0.96
SMAD4-206ENST00000588860 CAMK2BQ13554 666 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 KCNJ11Q14654 390 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 FASTKD3Q14CZ7 662 aaKnown RBP9.05□□□□□ -0.96
SMAD4-206ENST00000588860 LONRF1Q17RB8 773 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 FNBP1LQ5T0N5 605 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 FAM182AQ5T1J6 154 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 SYCP2LQ5T4T6 812 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 FAXCQ5TGI0 409 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 TTC19Q6DKK2 380 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-206ENST00000588860 KCNT2Q6UVM3 1135 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 VSTM1Q6UX27 236 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 C4orf22Q6V702 233 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 CAPN12Q6ZSI9 719 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 BZW1Q7L1Q6 419 aaKnown RBP9.05□□□□□ -0.96
SMAD4-206ENST00000588860 BEND5Q7L4P6 421 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 CCDC13Q8IYE1 715 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 ZBED8Q8IZ13 594 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 STKLD1Q8NE28 680 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 CCDC110Q8TBZ0 833 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 TFB1MQ8WVM0 346 aaKnown RBP9.05□□□□□ -0.96
SMAD4-206ENST00000588860 PGM2Q96G03 612 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 FUBP3Q96I24 572 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMAD4-206ENST00000588860 C8orf48Q96LL4 319 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 TOX2Q96NM4 488 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 EPAS1Q99814 870 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 CCDC77Q9BR77 488 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 KLC2Q9H0B6 622 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 TKTL2Q9H0I9 626 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 WDCPQ9H6R7 721 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 VPS37BQ9H9H4 285 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 ANLNQ9NQW6 1124 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 RAB6BQ9NRW1 208 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 ABCC13Q9NSE7 274 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 DTLQ9NZJ0 730 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 SCML2Q9UQR0 700 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 MYLKQ15746 1914 aa9.05□□□□□ -0.96
SMAD4-206ENST00000588860 PLXNA4Q9HCM2 1894 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 DENND4CQ5VZ89 1909 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 ALPK3Q96L96 1907 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 ERICH4A6NGS2 130 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 GOLGA8CPA6NN73 597 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 FAM72CH0Y354 149 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 I6L893 689 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 PPP1R12AO14974 1030 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 DCLK1O15075 740 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 ALOX15BO15296 676 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 EIF3HO15372 352 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 GCATO75600 419 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 STK10O94804 968 aaKnown RBP9.04□□□□□ -0.96
SMAD4-206ENST00000588860 AGTP01019 485 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 AMHP03971 560 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 MAGEA11P43364 429 aa9.04□□□□□ -0.96
SMAD4-206ENST00000588860 GJA8P48165 433 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms