RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 SLC12A8A0AV02 714 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 DCLK1O15075 740 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 COCHO43405 550 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 LPXNO60711 386 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 GAS8O95995 478 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 LRG1P02750 347 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 TPI1P60174 286 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 EIF3EP60228 445 aaKnown RBP26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 LMNB2Q03252 620 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 GBE1Q04446 702 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 SLC10A2Q12908 348 aaPredicted RBP26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 PTK6Q13882 451 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 MANEALQ5VSG8 457 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 DDX42Q86XP3 938 aaKnown RBP eCLIP26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 ALLCQ8N6M5 410 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 LRRC3Q9BY71 257 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 DNMT3LQ9UJW3 386 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 HEY1Q9Y5J3 304 aa26.91■■□□□ 1.9
SCAMP4-210ENST00000588555 MCF2LO15068 1137 aa26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 DAPK3O43293 454 aa26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 OAS1P00973 400 aaKnown RBP26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 DRG2P55039 364 aaKnown RBP26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 PDE12Q6L8Q7 609 aaKnown RBP26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 TMC8Q8IU68 726 aa26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 GSPT2Q8IYD1 628 aaKnown RBP26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 TMEM121Q9BTD3 319 aa26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 HBS1LQ9Y450 684 aaKnown RBP26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 HS3ST4Q9Y661 456 aa26.9■■□□□ 1.9
SCAMP4-210ENST00000588555 H0YGN5 161 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 MOCS2O96007 188 aaPredicted RBP26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 RBP3P10745 1247 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 ECHS1P30084 290 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 NR2C2P49116 596 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 NRG1Q02297 640 aaPredicted RBP26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 PPP1R7Q15435 360 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 TNS4Q8IZW8 715 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 TRIM31Q9BZY9 425 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 SIK2Q9H0K1 926 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 DPH5Q9H2P9 285 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 NKX2-4Q9H2Z4 354 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 DTLQ9NZJ0 730 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 ATG2AQ2TAZ0 1938 aa26.89■■□□□ 1.9
SCAMP4-210ENST00000588555 C2orf78A6NCI8 922 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 CLASP2O75122 1294 aaKnown RBP26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 APOEP02649 317 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 ERCC2P18074 760 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 HOXC13P31276 330 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 KPNA1P52294 538 aaPredicted RBP26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 MLLT6P55198 1093 aaPredicted RBP26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 CUL1Q13616 776 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 PAFAH1B3Q15102 231 aaKnown RBP26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 PIK3R6Q5UE93 754 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 RTL10Q7L3V2 364 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 EIF1ADQ8N9N8 165 aaKnown RBP26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 GLIS1Q8NBF1 620 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 IFT81Q8WYA0 676 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 C1orf74Q96LT6 269 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 C10orf88Q9H8K7 445 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 CERS4Q9HA82 394 aa26.89■■□□□ 1.89
SCAMP4-210ENST00000588555 SLC22A17Q8WUG5 538 aa26.88■■□□□ 1.89
SCAMP4-210ENST00000588555 BTN2A3PQ96KV6 586 aa26.88■■□□□ 1.89
SCAMP4-210ENST00000588555 OLFM3Q96PB7 478 aa26.88■■□□□ 1.89
SCAMP4-210ENST00000588555 RNF38Q9H0F5 515 aa26.88■■□□□ 1.89
SCAMP4-210ENST00000588555 FAM114A2Q9NRY5 505 aa26.88■■□□□ 1.89
SCAMP4-210ENST00000588555 NFU1Q9UMS0 254 aa26.88■■□□□ 1.89
SCAMP4-210ENST00000588555 MFSD11O43934 449 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 MAP3K6O95382 1288 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 IVDP26440 423 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 HTR7P34969 479 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 RPL21P46778 160 aaKnown RBP26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 GAREM2Q75VX8 874 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 ZC3H18Q86VM9 953 aaKnown RBP26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 MAN1C1Q9NR34 630 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 GRHL1Q9NZI5 618 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 SNX24Q9Y343 169 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 DENND4CQ5VZ89 1909 aa26.87■■□□□ 1.89
SCAMP4-210ENST00000588555 ERLIN1O75477 346 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 HMBSP08397 361 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 EPCAMP16422 314 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 EPHB2P29323 1055 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 KCNQ1P51787 676 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 GDF10P55107 478 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 TRIP13Q15645 432 aaPredicted RBP26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 RAB30Q15771 203 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 PABPC1LQ4VXU2 614 aaKnown RBP26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 PPM1LQ5SGD2 360 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 BEND6Q5SZJ8 279 aaPredicted RBP26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 GSTA5Q7RTV2 222 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 PRUNE1Q86TP1 453 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 HS6ST3Q8IZP7 471 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 ATP6V0D2Q8N8Y2 350 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 AENQ8WTP8 325 aaKnown RBP26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 MSRAQ9UJ68 235 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 XRCC4Q13426 336 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 MS4A13Q5J8X5 152 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 PPP2R2DQ66LE6 453 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 NUGGCQ68CJ6 796 aa26.86■■□□□ 1.89
SCAMP4-210ENST00000588555 C14orf80Q86SX3 495 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms