RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SDE2Q6IQ49 451 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 ATP6V0D2Q8N8Y2 350 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 SUMF1Q8NBK3 374 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 UCMAQ8WVF2 138 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 BTN2A3PQ96KV6 586 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 PRICKLE1Q96MT3 831 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-207ENST00000587256 C11orf70Q9BRQ4 267 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 IRX2Q9BZI1 471 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-207ENST00000587256 TPSD1Q9BZJ3 242 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 CIPCQ9C0C6 399 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 NUCKS1Q9H1E3 243 aaKnown RBP15.38■□□□□ 0.05
ATG4D-207ENST00000587256 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.38■□□□□ 0.05
ATG4D-207ENST00000587256 BCCIPQ9P287 314 aaKnown RBP eCLIP15.38■□□□□ 0.05
ATG4D-207ENST00000587256 SLC12A6Q9UHW9 1150 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 CLEC4EQ9ULY5 219 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 STARD13Q9Y3M8 1113 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 DMDP11532 3685 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 GPR179Q6PRD1 2367 aa15.38■□□□□ 0.05
ATG4D-207ENST00000587256 RIF1Q5UIP0 2472 aaKnown RBP15.37■□□□□ 0.05
ATG4D-207ENST00000587256 A0A1W2PQC6 194 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 TCRBV21S2A2A0A5A6 115 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 M0QYT0 321 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 GFRA2O00451 464 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 ADAM23O75077 832 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 CYP1A1P04798 512 aaPredicted RBP15.37■□□□□ 0.05
ATG4D-207ENST00000587256 ABCB4P21439 1286 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 NTSR1P30989 418 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 CCR1P32246 355 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 MATKP42679 507 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 SULT1E1P49888 294 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 EIF4HQ15056 248 aaKnown RBP15.37■□□□□ 0.05
ATG4D-207ENST00000587256 RAP1GAP2Q684P5 730 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 TMEM92Q6UXU6 159 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.37■□□□□ 0.05
ATG4D-207ENST00000587256 MFN1Q8IWA4 741 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 CCDC117Q8IWD4 279 aaPredicted RBP15.37■□□□□ 0.05
ATG4D-207ENST00000587256 MDGA1Q8NFP4 955 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 GAB3Q8WWW8 586 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 RUBCNQ92622 972 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.37■□□□□ 0.05
ATG4D-207ENST00000587256 CACNA2D2Q9NY47 1150 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 RRN3Q9NYV6 651 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 STIM2Q9P246 746 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 EBF1Q9UH73 591 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 XPO7Q9UIA9 1087 aaKnown RBP15.37■□□□□ 0.05
ATG4D-207ENST00000587256 GMEB2Q9UKD1 530 aa15.37■□□□□ 0.05
ATG4D-207ENST00000587256 LRRC53A6NM62 1247 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 KCNU1A8MYU2 1149 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 F5H5T6 163 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 HRO43593 1189 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 HNRNPLP14866 589 aaKnown RBP eCLIP15.36■□□□□ 0.05
ATG4D-207ENST00000587256 TACR2P21452 398 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 MMP8P22894 467 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 RPS24P62847 133 aaKnown RBP15.36■□□□□ 0.05
ATG4D-207ENST00000587256 FANCCQ00597 558 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 CDH18Q13634 790 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 MS4A13Q5J8X5 152 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 MPP7Q5T2T1 576 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 SND1Q7KZF4 910 aaKnown RBP eCLIP15.36■□□□□ 0.05
ATG4D-207ENST00000587256 LGI2Q8N0V4 545 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 PGBD3Q8N328 593 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 ZNF557Q8N988 423 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-207ENST00000587256 SLC30A5Q8TAD4 765 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 WFIKKN2Q8TEU8 576 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 HMGB4Q8WW32 186 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 NAP1L5Q96NT1 182 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-207ENST00000587256 ACOX2Q99424 681 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 METTL5Q9NRN9 209 aaKnown RBP15.36■□□□□ 0.05
ATG4D-207ENST00000587256 ABCB8Q9NUT2 735 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 GGA2Q9UJY4 613 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 HCN2Q9UL51 889 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 MYO6Q9UM54 1294 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 FAM186AA6NE01 2351 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 GVINP1Q7Z2Y8 2422 aa15.36■□□□□ 0.05
ATG4D-207ENST00000587256 ZBTB24O43167 697 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-207ENST00000587256 PABPC1P11940 636 aaKnown RBP15.35■□□□□ 0.05
ATG4D-207ENST00000587256 HLA-FP30511 346 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 FLT3P36888 993 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 CENPCQ03188 943 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 DEUP1Q05D60 604 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 STARD3Q14849 445 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 E2F5Q15329 346 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 ASIC2Q16515 512 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 CLEC16AQ2KHT3 1053 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 OTUD1Q5VV17 481 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-207ENST00000587256 LAIR1Q6GTX8 287 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 CHST9Q7L1S5 443 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 RASSF3Q86WH2 238 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 AHI1Q8N157 1196 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 CARNMT1Q8N4J0 409 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 BAP1Q92560 729 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 ERLEC1Q96DZ1 483 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 PCDHB18PQ96TA0 734 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 TBCBQ99426 244 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 NPY6RQ99463 290 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 AGPAT1Q99943 283 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 ELOVL2Q9NXB9 296 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 PAXBP1Q9Y5B6 917 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 OTOGLQ3ZCN5 2332 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 EP300Q09472 2414 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms