RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 RFWD2Q8NHY2 731 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 ST8SIA2Q92186 375 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 JAKMIP2Q96AA8 810 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 DIRC2Q96SL1 478 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 CD180Q99467 661 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 PIP5K1AQ99755 562 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 ZWILCHQ9H900 591 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 GRPEL1Q9HAV7 217 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 DRG1Q9Y295 367 aaKnown RBP6.97□□□□□ -1.29
TPM4-203ENST00000586193 PCDHGB5Q9Y5G0 923 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 SNX5Q9Y5X3 404 aa6.97□□□□□ -1.29
TPM4-203ENST00000586193 SOS1Q07889 1333 aaPredicted RBP6.97□□□□□ -1.29
TPM4-203ENST00000586193 RRBP1Q9P2E9 1410 aaKnown RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 A0A1W2PQ09 198 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 TMEM232C9JQI7 657 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 URODP06132 367 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 TNNT1P13805 278 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 BSGP35613 385 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 PPARGP37231 505 aaPredicted RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 PSMB10P40306 273 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 GARSP41250 739 aaKnown RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 NDUFV1P49821 464 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 TIRAPP58753 221 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 SCARB2Q14108 478 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 C1orf141Q5JVX7 400 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 FAM90A2PQ658T7 463 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 SFRP4Q6FHJ7 346 aaPredicted RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 CYP20A1Q6UW02 462 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 TMPRSS9Q7Z410 1059 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 ATG4DQ86TL0 474 aaPredicted RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 NPIPB3Q92617 1050 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 RNFT2Q96EX2 444 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 EYA3Q99504 573 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 VN1R3Q9BXE9 311 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 REXO4Q9GZR2 422 aaKnown RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 SMARCAD1Q9H4L7 1026 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 SYNPO2LQ9H987 977 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 PDE11AQ9HCR9 933 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 ATP8A2Q9NTI2 1148 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 ARGLU1Q9NWB6 273 aaPredicted RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 NTMQ9P121 344 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 LIMA1Q9UHB6 759 aaKnown RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 STEAP1Q9UHE8 339 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 FRMD4BQ9Y2L6 1034 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 UBE2J1Q9Y385 318 aaPredicted RBP6.96□□□□□ -1.3
TPM4-203ENST00000586193 KCNE2Q9Y6J6 123 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 RAPGEF6Q8TEU7 1601 aa6.96□□□□□ -1.3
TPM4-203ENST00000586193 GAGE10A6NGK3 116 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 F5H697 171 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 UBE2CO00762 179 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 VNN1O95497 513 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 TMEM225BP0DP42 221 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 KCNA2P16389 499 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 GRK5P34947 590 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 TNNT3P45378 269 aaPredicted RBP6.95□□□□□ -1.3
TPM4-203ENST00000586193 PCP4P48539 62 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 GSK3AP49840 483 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 UFM1P61960 85 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 SP2Q02086 613 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 SLC10A5Q5PT55 438 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 RBM20Q5T481 1227 aaKnown RBP6.95□□□□□ -1.3
TPM4-203ENST00000586193 SLC9A4Q6AI14 798 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 ELOA2Q8IYF1 753 aaPredicted RBP6.95□□□□□ -1.3
TPM4-203ENST00000586193 SCML4Q8N228 414 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 TOR1AIP2Q8NFQ8 470 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 OR52N2Q8NGI0 321 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 CLEC4CQ8WTT0 213 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 OSCP1Q8WVF1 389 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 MBD6Q96DN6 1003 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 SAAL1Q96ER3 474 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 TMEM176AQ96HP8 235 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 FAR2Q96K12 515 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 JAKMIP1Q96N16 626 aaKnown RBP6.95□□□□□ -1.3
TPM4-203ENST00000586193 NEU1Q99519 415 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 DPYSL5Q9BPU6 564 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 DESI2Q9BSY9 194 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 HTATIP2Q9BUP3 242 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 CTDSP1Q9GZU7 261 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 NSUN3Q9H649 340 aaKnown RBP6.95□□□□□ -1.3
TPM4-203ENST00000586193 GCM1Q9NP62 436 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 ATP10BO94823 1461 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 LRRIQ1Q96JM4 1722 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 MAP3K1Q13233 1512 aa6.95□□□□□ -1.3
TPM4-203ENST00000586193 FHOD3Q2V2M9 1422 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 ADGRL1O94910 1474 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 GOLGA6L10A0A0M3HER8 536 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 LIPT2A6NK58 231 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 SMTNL1A8MU46 457 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 E7ENX8 843 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 CLGNO14967 610 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 FYB1O15117 783 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 NKX2-8O15522 239 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 TBCAO75347 108 aaKnown RBP6.94□□□□□ -1.3
TPM4-203ENST00000586193 HLA-DOAP06340 250 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 HSP90AB1P08238 724 aaKnown RBP6.94□□□□□ -1.3
TPM4-203ENST00000586193 LYL1P12980 280 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 GLDCP23378 1020 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 CALRP27797 417 aaKnown RBP6.94□□□□□ -1.3
TPM4-203ENST00000586193 ABCD1P33897 745 aa6.94□□□□□ -1.3
TPM4-203ENST00000586193 CPA2P48052 419 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms