RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	TBC1D20	Q96BZ9	403 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	EIF3C	Q99613	913 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	FAM167B	Q9BTA0	163 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GBA2	Q9HCG7	927 aa	Predicted RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GJB4	Q9NTQ9	266 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	TFCP2L1	Q9NZI6	479 aa		4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	LRRFIP2	Q9Y608	721 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.16	□□□□□ -1.74
PPP4R1-229	ENST00000584754	EEA1	Q15075	1411 aa		4.15	□□□□□ -1.74
PPP4R1-229	ENST00000584754	PNMA6E	A0A0J9YXQ4	647 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CGB1	A6NKQ9	187 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TARM1	B6A8C7	271 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ASNA1	O43681	348 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TMPRSS11D	O60235	418 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ACTL6B	O94805	426 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NPS	P0C0P6	89 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	MMP8	P22894	467 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TPTE	P56180	551 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TIRAP	P58753	221 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CYP4F2	P78329	520 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SLC10A2	Q12908	348 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FOXF2	Q12947	444 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CBFB	Q13951	182 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TMTC4	Q5T4D3	741 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ABLIM2	Q6H8Q1	611 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	DPY19L3	Q6ZPD9	716 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	MMS22L	Q6ZRQ5	1243 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PARS2	Q7L3T8	475 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	KCTD20	Q7Z5Y7	419 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	OR6Y1	Q8NGX8	325 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	RP9	Q8TA86	221 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SOCS4	Q8WXH5	440 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SH2D3A	Q9BRG2	576 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PYM1	Q9BRP8	204 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SNX15	Q9NRS6	342 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NDUFAF4	Q9P032	175 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	VPS51	Q9UID3	782 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SLC13A4	Q9UKG4	626 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	DRG1	Q9Y295	367 aa	Known RBP	4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PZP	P20742	1482 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CEP350	Q5VT06	3117 aa		4.15	□□□□□ -1.75
PPP4R1-229	ENST00000584754	UGGT1	Q9NYU2	1555 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	KIAA1107	Q9UPP5	1409 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ROBO1	Q9Y6N7	1651 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NLRP1	Q9C000	1473 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FCHO1	O14526	889 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ANXA6	P08133	673 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PECAM1	P16284	738 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PAX3	P23760	479 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	MPG	P29372	298 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	GSTM5	P46439	218 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	AARS	P49588	968 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TBX2	Q13207	712 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	KCNAB1	Q14722	419 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TUBB8	Q3ZCM7	444 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TRIM60	Q495X7	471 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ARHGAP15	Q53QZ3	475 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ZNF569	Q5MCW4	686 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	NAA35	Q5VZE5	725 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	RAP1GAP2	Q684P5	730 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	RINT1	Q6NUQ1	792 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	USP38	Q8NB14	1042 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	ABHD11	Q8NFV4	315 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	STT3B	Q8TCJ2	826 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	REPS1	Q96D71	796 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	C18orf8	Q96DM3	657 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FAR2	Q96K12	515 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	WDR24	Q96S15	920 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	C17orf80	Q9BSJ5	609 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	DDX23	Q9BUQ8	820 aa	Known RBP	4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	UNC45A	Q9H3U1	944 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	PRDM8	Q9NQV8	689 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	DUSP22	Q9NRW4	184 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	RASSF1	Q9NS23	344 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	IGSF9	Q9P2J2	1179 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	GJD2	Q9UKL4	321 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	BAG5	Q9UL15	447 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SNX14	Q9Y5W7	946 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FAM135A	Q9P2D6	1515 aa		4.14	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FAM135B	Q49AJ0	1406 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	MIA2	Q96PC5	1412 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CCDC18	Q5T9S5	1454 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	POLR2A	P24928	1970 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	KDM5D	Q9BY66	1539 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	AQP12B	A6NM10	295 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	AP4M1	O00189	453 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TRIM38	O00635	465 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	SEPT4	O43236	478 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	FAM155B	O75949	473 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	TMEM225B	P0DP42	221 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	VEGFA	P15692	232 aa	Predicted RBP	4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	XBP1	P17861	261 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CD53	P19397	219 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	CERS1	P27544	350 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	MAPK9	P45984	424 aa		4.13	□□□□□ -1.75
PPP4R1-229	ENST00000584754	EIF4A1	P60842	406 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms