RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ITIH3Q06033 890 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 PLD1Q13393 1074 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 BOLA3Q53S33 107 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 HSP90AA5PQ58FG0 334 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
RFFL-212ENST00000584655 LRRC8DQ7L1W4 858 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 POLNQ7Z5Q5 900 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 TBC1D1Q86TI0 1168 aaPredicted RBP10.6□□□□□ -0.71
RFFL-212ENST00000584655 ATP2A3Q93084 1043 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 VCPIP1Q96JH7 1222 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 XPO6Q96QU8 1125 aaKnown RBP10.6□□□□□ -0.71
RFFL-212ENST00000584655 TACO1Q9BSH4 297 aaKnown RBP10.6□□□□□ -0.71
RFFL-212ENST00000584655 KLC2Q9H0B6 622 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 ARHGEF4Q9NR80 690 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 SAMD15Q9P1V8 674 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 SHOC2Q9UQ13 582 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 RPS6KL1Q9Y6S9 549 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 GMNCA6NCL1 334 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 CSF2RAP15509 400 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 PTK7Q13308 1070 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 ZNF460Q14592 562 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 ANO4Q32M45 955 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 RTP2Q5QGT7 225 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 ZNF280DQ6N043 979 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 LVRNQ6Q4G3 990 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 CCDC121Q6ZUS5 278 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 PCGF5Q86SE9 256 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 C14orf80Q86SX3 495 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 CHSY1Q86X52 802 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 ARFGAP2Q8N6H7 521 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 NPWQ8N729 165 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 EFHBQ8N7U6 833 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 POPDC2Q9HBU9 364 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 NT5MQ9NPB1 228 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 H0YGN5 161 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 APOC4-APOC2K7ER74 178 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 NBNO60934 754 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 APOC2P02655 101 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 IL4RP24394 825 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 L1CAMP32004 1257 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 MATKP42679 507 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 FAM187BQ17R55 369 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 EFHC1Q5JVL4 640 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 TNS4Q8IZW8 715 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 KLHDC9Q8NEP7 349 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 TFB1MQ8WVM0 346 aaKnown RBP10.6□□□□□ -0.71
RFFL-212ENST00000584655 TBC1D31Q96DN5 1066 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 MFSD3Q96ES6 412 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 FCRL2Q96LA5 508 aaPredicted RBP10.6□□□□□ -0.71
RFFL-212ENST00000584655 VIPAS39Q9H9C1 493 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 SLC38A7Q9NVC3 462 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 NFS1Q9Y697 457 aa10.6□□□□□ -0.71
RFFL-212ENST00000584655 A0A0U1RQF3 1178 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 ZBTB24O43167 697 aaPredicted RBP10.59□□□□□ -0.71
RFFL-212ENST00000584655 PPFIA2O75334 1257 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 CNTN5O94779 1100 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 VAV1P15498 845 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 TSPAN8P19075 237 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 POU5F1BQ06416 359 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 TUSC3Q13454 348 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 PTK6Q13882 451 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 SPRED3Q2MJR0 410 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 BBS12Q6ZW61 710 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 LRRC52Q8N7C0 313 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 DQX1Q8TE96 717 aaKnown RBP10.59□□□□□ -0.71
RFFL-212ENST00000584655 COLEC11Q9BWP8 271 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 LHX5Q9H2C1 402 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 CRISPLD1Q9H336 500 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 SARS2Q9NP81 518 aaKnown RBP10.59□□□□□ -0.71
RFFL-212ENST00000584655 FKTNO75072 461 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 PLK1P53350 603 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 UPP1Q16831 310 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 C6orf118Q5T5N4 469 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 RSPO2Q6UXX9 243 aaPredicted RBP10.59□□□□□ -0.71
RFFL-212ENST00000584655 UBR7Q8N806 425 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 CASP8AP2Q9UKL3 1982 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 AGTP01019 485 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 NFKB1P19838 968 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 AARSP49588 968 aaKnown RBP eCLIP10.59□□□□□ -0.71
RFFL-212ENST00000584655 PPIL6Q8IXY8 311 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 CACNA2D3Q8IZS8 1091 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 SERPINB12Q96P63 405 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 PLCD4Q9BRC7 762 aa10.59□□□□□ -0.71
RFFL-212ENST00000584655 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.59□□□□□ -0.717e-8■■■■■ 32.9
RFFL-212ENST00000584655 HAS3O00219 553 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PAGE1O75459 146 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 KCNA4P22459 653 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 ADRA1BP35368 520 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PNPLA4P41247 253 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 SLC11A1P49279 550 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 CBX2Q14781 532 aaPredicted RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 SLC1A5Q15758 541 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 ZBTB6Q15916 424 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PPP2R5EQ16537 467 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 TCTN1Q2MV58 587 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PPP1R15BQ5SWA1 713 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 RNF19BQ6ZMZ0 732 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 HTR3CQ8WXA8 447 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 SMARCD1Q96GM5 515 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 YME1L1Q96TA2 773 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms