RNA–Protein interactions for RNA: ENST00000583903.5

PPP4R1-226, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-226ENST00000583903 NOLC1Q14978 699 aaKnown RBP eCLIP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 KRT31Q15323 416 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 SHBQ15464 509 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 IGFBP7Q16270 282 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 SNRNP35Q16560 246 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 NFE2Q16621 373 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 TCP11X2Q5H9J9 407 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 MIIPQ5JXC2 388 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 PRAMEF14Q5SWL7 426 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 BTBD8Q5XKL5 378 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 SLFN12LQ6IEE8 588 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 HS2ST1Q7LGA3 356 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 METTL23Q86XA0 190 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 TRIM59Q8IWR1 403 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 FAM186BQ8IYM0 893 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 GPD1LQ8N335 351 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 EID2Q8N6I1 236 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 NOC3LQ8WTT2 800 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 SNX19Q92543 992 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 ELMO3Q96BJ8 720 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 CEP63Q96MT8 703 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 NAP1L5Q96NT1 182 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 PHF12Q96QT6 1004 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 MMS19Q96T76 1030 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 ELF4Q99607 663 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 TSG101Q99816 390 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 NAT10Q9H0A0 1025 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 RNF38Q9H0F5 515 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 THAP9Q9H5L6 903 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 C6orf106Q9H6K1 298 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 RPF1Q9H9Y2 349 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 POLR1BQ9H9Y6 1135 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 PDE11AQ9HCR9 933 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 ABCB6Q9NP58 842 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 THSD1Q9NS62 852 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 TAB2Q9NYJ8 693 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 CFAP97Q9P2B7 532 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 TBC1D14Q9P2M4 693 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 CPQQ9Y646 472 aa7.4□□□□□ -1.22
PPP4R1-226ENST00000583903 SMTNL1A8MU46 457 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 LACTBL1A8MY62 500 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 PIRO00625 290 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CYB561D2O14569 222 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CETN3O15182 167 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 SLC16A3O15427 465 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 EFSO43281 561 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 XPOTO43592 962 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 ITGB2P05107 769 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CLTAP09496 248 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 FAM87AP0C7U9 286 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CKMT2P17540 419 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 ABCB4P21439 1286 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 ABCD1P33897 745 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 MATR3P43243 847 aaKnown RBP eCLIP7.39□□□□□ -1.239e-6■■■■□ 21.7
PPP4R1-226ENST00000583903 INHBCP55103 352 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 MARSP56192 900 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 E2F1Q01094 437 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 APBA1Q02410 837 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CBWD6Q4V339 395 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CBWD3Q5JTY5 395 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CBWD5Q5RIA9 395 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 C9orf57Q5W0N0 161 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 WSCD1Q658N2 575 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 GRAMD4Q6IC98 578 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 IGF2-ASQ6U949 168 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 TMPRSS6Q8IU80 811 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 BRSK2Q8IWQ3 736 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 OR5B17Q8NGF7 314 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CXorf38Q8TB03 319 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 GOLGA5Q8TBA6 731 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 EXTL1Q92935 676 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 SLC35C1Q96A29 364 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CCDC127Q96BQ5 260 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 OTUB2Q96DC9 234 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 SIPA1Q96FS4 1042 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 ORAI3Q9BRQ5 295 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 ARHGAP9Q9BRR9 750 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 EPN3Q9H201 632 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 SMPD4Q9NXE4 827 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 RBAKQ9NYW8 714 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CGNQ9P2M7 1197 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 LIMA1Q9UHB6 759 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 OTOGQ6ZRI0 2925 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 NF1P21359 2839 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 CSMD1Q96PZ7 3565 aa7.39□□□□□ -1.23
PPP4R1-226ENST00000583903 ZNF840PA6NDX5 716 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 LRRC10BA6NIK2 292 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 BECN2A8MW95 431 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 VILLO15195 856 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 TEX33O43247 280 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 TSPAN3O60637 253 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 USP12O75317 370 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 ACP1P24666 158 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 RPL13P26373 211 aaKnown RBP7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 EEF1GP26641 437 aaKnown RBP7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 CD27P26842 260 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 PSMC2P35998 433 aaKnown RBP7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 KLK7P49862 253 aa7.38□□□□□ -1.23
PPP4R1-226ENST00000583903 ZNF132P52740 706 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms