RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 TOGARAM2Q6ZUX3 1019 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 KRT27Q7Z3Y8 459 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 IRF2BP2Q7Z5L9 587 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 UEVLDQ8IX04 471 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 CCDC146Q8IYE0 955 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 HMCESQ96FZ2 354 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 SLC39A13Q96H72 371 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 ZFYVE19Q96K21 471 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 ARFGAP3Q9NP61 516 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 HEY2Q9UBP5 337 aa4.12□□□□□ -1.75
VAPA-206ENST00000583475 UBE2J1Q9Y385 318 aaPredicted RBP4.12□□□□□ -1.75
VAPA-206ENST00000583475 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.12□□□□□ -1.75
VAPA-206ENST00000583475 GOLGA6L3A6NEY3 463 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 AQP12BA6NM10 295 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 M0QYT0 321 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 SOCS2O14508 198 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 NKX2-8O15522 239 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 DNPH1O43598 174 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 PLIN1O60240 522 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 TMEM191BP0C7N4 346 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 STARD3Q14849 445 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 AAK1Q2M2I8 961 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 FAM57BQ71RH2 274 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 TRABD2AQ86V40 505 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 MORC1Q86VD1 984 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 ANKRD13BQ86YJ7 626 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 RHPN2Q8IUC4 686 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 ARL14EPQ8N8R7 260 aaPredicted RBP4.11□□□□□ -1.75
VAPA-206ENST00000583475 PMM1Q92871 262 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 ZBTB9Q96C00 473 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 GPR78Q96P69 363 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 PRPF18Q99633 342 aaKnown RBP4.11□□□□□ -1.75
VAPA-206ENST00000583475 TP63Q9H3D4 680 aaPredicted RBP4.11□□□□□ -1.75
VAPA-206ENST00000583475 MOV10Q9HCE1 1003 aaKnown RBP4.11□□□□□ -1.75
VAPA-206ENST00000583475 OBP2BQ9NPH6 170 aa4.11□□□□□ -1.75
VAPA-206ENST00000583475 TTBK1Q5TCY1 1321 aaPredicted RBP4.11□□□□□ -1.75
VAPA-206ENST00000583475 FFAR2O15552 330 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 USP12O75317 370 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 RPP40O75818 363 aaKnown RBP4.1□□□□□ -1.75
VAPA-206ENST00000583475 SGPL1O95470 568 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 SETSIPP0DME0 302 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 TFEBP19484 476 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 HTR3AP46098 478 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 ALDH18A1P54886 795 aaKnown RBP4.1□□□□□ -1.75
VAPA-206ENST00000583475 SLC12A2P55011 1212 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 MTX1Q13505 466 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 CBFBQ13951 182 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 PTK2BQ14289 1009 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 SPARCL1Q14515 664 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 TWIST1Q15672 202 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 GLE1Q53GS7 698 aaKnown RBP4.1□□□□□ -1.75
VAPA-206ENST00000583475 EPHA10Q5JZY3 1008 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 AWAT2Q6E213 333 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 RINT1Q6NUQ1 792 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 GGT6Q6P531 493 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 ZNF474Q6S9Z5 364 aaPredicted RBP4.1□□□□□ -1.75
VAPA-206ENST00000583475 NRSN1Q8IZ57 195 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 EXD3Q8N9H8 876 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 OR1N1Q8NGS0 311 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 STYXQ8WUJ0 223 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 WDR60Q8WVS4 1066 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 VCPIP1Q96JH7 1222 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 FAR2Q96K12 515 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 TRIM2Q9C040 744 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 WDR12Q9GZL7 423 aaKnown RBP4.1□□□□□ -1.75
VAPA-206ENST00000583475 TMEM45AQ9NWC5 275 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 ZBTB1Q9Y2K1 713 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 EMSYQ7Z589 1322 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 EVPLQ92817 2033 aa4.1□□□□□ -1.75
VAPA-206ENST00000583475 A0A087WV62 115 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 TRBV5-3A0A0A0MS03 114 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 ZNF814B7Z6K7 855 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 ASNA1O43681 348 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 PPP6R2O75170 966 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 BMP15O95972 392 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 CYP3A4P08684 503 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 HMGB1P09429 215 aaKnown RBP4.09□□□□□ -1.75
VAPA-206ENST00000583475 PEPDP12955 493 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 AKR1A1P14550 325 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 ME1P48163 572 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 PLCD1P51178 756 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 SLC37A1P57057 533 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 FOXL2P58012 376 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 RPL15P61313 204 aaKnown RBP4.09□□□□□ -1.75
VAPA-206ENST00000583475 B4GALNT1Q00973 533 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 UBE4AQ14139 1066 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 LEXMQ3ZCV2 418 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 WDR93Q6P2C0 686 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 DHRS13Q6UX07 377 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 SLC39A5Q6ZMH5 540 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 ZNF366Q8N895 744 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 ZNF527Q8NB42 609 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 SRFBP1Q8NEF9 429 aaKnown RBP4.09□□□□□ -1.75
VAPA-206ENST00000583475 ZNF548Q8NEK5 533 aaPredicted RBP4.09□□□□□ -1.75
VAPA-206ENST00000583475 FAM71BQ8TC56 605 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 RSC1A1Q92681 617 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 ZNF347Q96SE7 839 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 PIMREGQ9BSJ6 248 aa4.09□□□□□ -1.75
VAPA-206ENST00000583475 TRMOQ9BU70 441 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms