RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 DARS2Q6PI48 645 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 B4GALNT4Q76KP1 1039 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 TCEAL8Q8IYN2 117 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 ADGRF4Q8IZF3 695 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 TMEM199Q8N511 208 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 BCAS4Q8TDM0 211 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 MSI2Q96DH6 328 aaKnown RBP4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 P2RY11Q96G91 374 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 ZPBPQ9BS86 351 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 DECR2Q9NUI1 292 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 PCDHA12Q9UN75 941 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 IFT140Q96RY7 1462 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 MBD5Q9P267 1494 aa4.73□□□□□ -1.65
SMCHD1-208ENST00000583344 TRBV5-3A0A0A0MS03 114 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 A0A0G2JK05 382 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 PLEKHD1A6NEE1 506 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 FOXN3O00409 490 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 TCERG1O14776 1098 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 ZBED1O96006 694 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 PLA2G2AP14555 144 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 DRD1P21728 446 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 NDUFS1P28331 727 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 ALDH7A1P49419 539 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 RHDQ02161 417 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 RALBP1Q15311 655 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 NFE2Q16621 373 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 PLEKHG6Q3KR16 790 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 NXNQ6DKJ4 435 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 DLK2Q6UY11 383 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 SLC44A5Q8NCS7 719 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 AKAP1Q92667 903 aaKnown RBP eCLIP4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 ZNF479Q96JC4 524 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 TUBB6Q9BUF5 446 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 PAPOLBQ9NRJ5 636 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 CHPF2Q9P2E5 772 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 PCDHGB6Q9Y5F9 930 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 BRD4O60885 1362 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 ADGRL2O95490 1459 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 KIAA1107Q9UPP5 1409 aa4.72□□□□□ -1.65
SMCHD1-208ENST00000583344 IQGAP2Q13576 1575 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 PZPP20742 1482 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 A0A087WZ62 844 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 CBFA2T3O75081 653 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 ARP10275 920 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 HOXB2P14652 356 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 TFEBP19484 476 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 ATICP31939 592 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 SOX2P48431 317 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 DGKQP52824 942 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 FAM193AP78312 1265 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 BFSP2Q13515 415 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 KCNJ12Q14500 433 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 INPP5JQ15735 1006 aaPredicted RBP4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 RNF44Q7L0R7 432 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 RFX6Q8HWS3 928 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 CELF1Q92879 486 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 CCDC136Q96JN2 1154 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 MYH16Q9H6N6 1097 aa4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 HEYLQ9NQ87 328 aaPredicted RBP4.71□□□□□ -1.66
SMCHD1-208ENST00000583344 KIF15Q9NS87 1388 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 BCORL1Q5H9F3 1711 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 C4orf47A7E2U8 309 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 USP12O75317 370 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 HRGP04196 525 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 ANXA2P07355 339 aaKnown RBP4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 ANP32AP39687 249 aaKnown RBP4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 P2RX3P56373 397 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 GPS1Q13098 491 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 GORABQ5T7V8 394 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 ABLIM2Q6H8Q1 611 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 CHST15Q7LFX5 561 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 SRGAP1Q7Z6B7 1085 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 UEVLDQ8IX04 471 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 SDR16C5Q8N3Y7 309 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 WDR24Q96S15 920 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 SENP7Q9BQF6 1050 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 APOL5Q9BWW9 433 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 RNF26Q9BY78 433 aaPredicted RBP4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 SLCO5A1Q9H2Y9 848 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 THSD1Q9NS62 852 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 AGO2Q9UKV8 859 aaKnown RBP4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 G3BP2Q9UN86 482 aaKnown RBP4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 RIPOR2Q9Y4F9 1068 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 ZMYM4Q5VZL5 1548 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 KIAA0586Q9BVV6 1533 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 KDM5CP41229 1560 aa4.7□□□□□ -1.66
SMCHD1-208ENST00000583344 USP47Q96K76 1375 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 VSTM5A8MXK1 200 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 PRSS44E7EML9 344 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 TPD52L2O43399 206 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 SLC28A2O43868 658 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 ATG13O75143 517 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 ZC3H11AO75152 810 aaKnown RBP eCLIP4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 NGFRP08138 427 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 SLC3A2P08195 630 aaKnown RBP4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 DUSP1P28562 367 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 CDC25AP30304 524 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 HOXD12P35452 270 aa4.69□□□□□ -1.66
SMCHD1-208ENST00000583344 IGHMBP2P38935 993 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms