RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 ERICH3Q5RHP9 1530 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 GXYLT2A0PJZ3 443 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 PPP6CO00743 305 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 PPP6R2O75170 966 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 FBLP22087 321 aaKnown RBP5.02□□□□□ -1.61
NF1-220ENST00000581113 NDUFS1P28331 727 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 SLC8A1P32418 973 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 AGTR2P50052 363 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 KRT72Q14CN4 511 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 ATPAF1Q5TC12 328 aaPredicted RBP5.02□□□□□ -1.61
NF1-220ENST00000581113 SULT6B1Q6IMI4 303 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 ZNF813Q6ZN06 617 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 CNGA4Q8IV77 575 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 CACNA2D3Q8IZS8 1091 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 EID2BQ96D98 161 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 QTRT1Q9BXR0 403 aaKnown RBP5.02□□□□□ -1.61
NF1-220ENST00000581113 BRD8Q9H0E9 1235 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 MAGEH1Q9H213 219 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 ASNSD1Q9NWL6 643 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 SEMA5BQ9P283 1151 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 GRHPRQ9UBQ7 328 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 HERC5Q9UII4 1024 aaKnown RBP5.02□□□□□ -1.61
NF1-220ENST00000581113 NFU1Q9UMS0 254 aa5.02□□□□□ -1.61
NF1-220ENST00000581113 hCG_1642624A0A1W2PR95 340 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 CGB1A6NKQ9 187 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 PRYO14603 147 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 ACTL6BO94805 426 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 CELA2AP08217 269 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 PEPDP12955 493 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 TACR3P29371 465 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 ARHGAP25P42331 645 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 RNASELQ05823 741 aaKnown RBP5.01□□□□□ -1.61
NF1-220ENST00000581113 SF3A3Q12874 501 aaKnown RBP eCLIP5.01□□□□□ -1.61
NF1-220ENST00000581113 PDCD2Q16342 344 aaPredicted RBP5.01□□□□□ -1.61
NF1-220ENST00000581113 CCDC142Q17RM4 750 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 AAK1Q2M2I8 961 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 GRAMD1BQ3KR37 738 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 ZNF569Q5MCW4 686 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 GORABQ5T7V8 394 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 YTHDF3Q7Z739 585 aaKnown RBP5.01□□□□□ -1.61
NF1-220ENST00000581113 ZNF575Q86XF7 245 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 CCDC117Q8IWD4 279 aaPredicted RBP5.01□□□□□ -1.61
NF1-220ENST00000581113 MYCT1Q8N699 235 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 HMGB4Q8WW32 186 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 REXO5Q96IC2 774 aaKnown RBP5.01□□□□□ -1.61
NF1-220ENST00000581113 MECRQ9BV79 373 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 SORBS1Q9BX66 1292 aaKnown RBP5.01□□□□□ -1.61
NF1-220ENST00000581113 SEMA4CQ9C0C4 833 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 KCNK9Q9NPC2 374 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 CNTN6Q9UQ52 1028 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 KAT6AQ92794 2004 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 CEP170Q5SW79 1584 aa5.01□□□□□ -1.61
NF1-220ENST00000581113 LOC105369274A0A096LPK9 316 aa5□□□□□ -1.61
NF1-220ENST00000581113 LOC102723532A0A0G2JNH3 316 aa5□□□□□ -1.61
NF1-220ENST00000581113 C16orf96A6NNT2 1141 aa5□□□□□ -1.61
NF1-220ENST00000581113 DSCR3O14972 297 aa5□□□□□ -1.61
NF1-220ENST00000581113 TCEA3O75764 348 aa5□□□□□ -1.61
NF1-220ENST00000581113 CENPBP07199 599 aaPredicted RBP5□□□□□ -1.61
NF1-220ENST00000581113 STAT6P42226 847 aa5□□□□□ -1.61
NF1-220ENST00000581113 POLE2P56282 527 aa5□□□□□ -1.61
NF1-220ENST00000581113 AP2B1P63010 937 aa5□□□□□ -1.61
NF1-220ENST00000581113 SRSF7Q16629 238 aaKnown RBP eCLIP5□□□□□ -1.61
NF1-220ENST00000581113 TIGD6Q17RP2 521 aa5□□□□□ -1.61
NF1-220ENST00000581113 KIAA1614Q5VZ46 1190 aa5□□□□□ -1.61
NF1-220ENST00000581113 SLC18B1Q6NT16 456 aa5□□□□□ -1.61
NF1-220ENST00000581113 OR4N4Q8N0Y3 316 aa5□□□□□ -1.61
NF1-220ENST00000581113 GALNT16Q8N428 558 aa5□□□□□ -1.61
NF1-220ENST00000581113 RSC1A1Q92681 617 aa5□□□□□ -1.61
NF1-220ENST00000581113 MAP4K1Q92918 833 aa5□□□□□ -1.61
NF1-220ENST00000581113 MLXIPQ9HAP2 919 aa5□□□□□ -1.61
NF1-220ENST00000581113 PRDM8Q9NQV8 689 aa5□□□□□ -1.61
NF1-220ENST00000581113 RAB21Q9UL25 225 aa5□□□□□ -1.61
NF1-220ENST00000581113 SIRT4Q9Y6E7 314 aaPredicted RBP5□□□□□ -1.61
NF1-220ENST00000581113 SMIM35A0A1B0GVV1 85 aa5□□□□□ -1.61
NF1-220ENST00000581113 HMX3A6NHT5 357 aa5□□□□□ -1.61
NF1-220ENST00000581113 RRHO14718 337 aa5□□□□□ -1.61
NF1-220ENST00000581113 NKX2-8O15522 239 aa5□□□□□ -1.61
NF1-220ENST00000581113 NBNO60934 754 aa5□□□□□ -1.61
NF1-220ENST00000581113 PRR35P0CG20 571 aa5□□□□□ -1.61
NF1-220ENST00000581113 HOXD12P35452 270 aa5□□□□□ -1.61
NF1-220ENST00000581113 ABCG1P45844 678 aa5□□□□□ -1.61
NF1-220ENST00000581113 YPEL5P62699 121 aa5□□□□□ -1.61
NF1-220ENST00000581113 RPS6KA2Q15349 733 aa5□□□□□ -1.61
NF1-220ENST00000581113 EZH2Q15910 746 aaKnown RBP5□□□□□ -1.61
NF1-220ENST00000581113 FAM110CQ1W6H9 321 aa5□□□□□ -1.61
NF1-220ENST00000581113 SUPT20HL1Q3ZLR7 823 aa5□□□□□ -1.61
NF1-220ENST00000581113 TRIM60Q495X7 471 aa5□□□□□ -1.61
NF1-220ENST00000581113 ERCC6L2Q5T890 1561 aa5□□□□□ -1.61
NF1-220ENST00000581113 WDR93Q6P2C0 686 aa5□□□□□ -1.61
NF1-220ENST00000581113 NFRKBQ6P4R8 1299 aa5□□□□□ -1.61
NF1-220ENST00000581113 TFAP2DQ7Z6R9 452 aa5□□□□□ -1.61
NF1-220ENST00000581113 NEK8Q86SG6 692 aa5□□□□□ -1.61
NF1-220ENST00000581113 SLC44A2Q8IWA5 706 aaPredicted RBP5□□□□□ -1.61
NF1-220ENST00000581113 SRRM1Q8IYB3 904 aaKnown RBP5□□□□□ -1.61
NF1-220ENST00000581113 SCAMP5Q8TAC9 235 aa5□□□□□ -1.61
NF1-220ENST00000581113 STT3BQ8TCJ2 826 aa5□□□□□ -1.61
NF1-220ENST00000581113 ZNF398Q8TD17 642 aa5□□□□□ -1.61
NF1-220ENST00000581113 ASB12Q8WXK4 309 aa5□□□□□ -1.61
NF1-220ENST00000581113 CCT6BQ92526 530 aa5□□□□□ -1.61
NF1-220ENST00000581113 PIGKQ92643 395 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms