RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 SLC30A4O14863 429 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 GABBR2O75899 941 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 TRUB2O95900 331 aaKnown RBP20.9■□□□□ 0.94
SMG8-204ENST00000580498 CHRM1P11229 460 aaPredicted RBP20.9■□□□□ 0.94
SMG8-204ENST00000580498 PABPC1P11940 636 aaKnown RBP20.9■□□□□ 0.94
SMG8-204ENST00000580498 POLR2EP19388 210 aaKnown RBP20.9■□□□□ 0.94
SMG8-204ENST00000580498 ST8SIA6P61647 398 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 FNDC3BQ53EP0 1204 aaKnown RBP20.9■□□□□ 0.94
SMG8-204ENST00000580498 PLA2G2CQ5R387 149 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 PIK3R6Q5UE93 754 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 KLHDC7AQ5VTJ3 777 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 LYSMD4Q5XG99 296 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 CHST9Q7L1S5 443 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 TAC4Q86UU9 113 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 FAM71AQ8IYT1 594 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 C1orf131Q8NDD1 294 aaKnown RBP20.9■□□□□ 0.94
SMG8-204ENST00000580498 GPT2Q8TD30 523 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 PIGKQ92643 395 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 BTN2A3PQ96KV6 586 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 PCMTD1Q96MG8 357 aaPredicted RBP20.9■□□□□ 0.94
SMG8-204ENST00000580498 SIX2Q9NPC8 291 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 ACP6Q9NPH0 428 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 ABCB8Q9NUT2 735 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 RRN3Q9NYV6 651 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 STIM2Q9P246 746 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 PAXBP1Q9Y5B6 917 aa20.9■□□□□ 0.94
SMG8-204ENST00000580498 A0A1W2PQF6 199 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 EPHX1P07099 455 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 UCHL3P15374 230 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 NDUFV2P19404 249 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 BCKDHBP21953 392 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 CCR1P32246 355 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 HOXD12P35452 270 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 LIMK1P53667 647 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 ATXN1P54253 815 aaKnown RBP20.89■□□□□ 0.93
SMG8-204ENST00000580498 MYL5Q02045 173 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 APBA1Q02410 837 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 ZNF234Q14588 700 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 SF3A2Q15428 464 aaKnown RBP20.89■□□□□ 0.93
SMG8-204ENST00000580498 CCDC6Q16204 474 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 MAP7D1Q3KQU3 841 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 RFWD3Q6PCD5 774 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 RBM43Q6ZSC3 357 aaKnown RBP20.89■□□□□ 0.93
SMG8-204ENST00000580498 SLC47A2Q86VL8 602 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 CHSY1Q86X52 802 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 ADAM32Q8TC27 787 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 PRCCQ92733 491 aaPredicted RBP20.89■□□□□ 0.93
SMG8-204ENST00000580498 FCRL2Q96LA5 508 aaPredicted RBP20.89■□□□□ 0.93
SMG8-204ENST00000580498 PPP1R9BQ96SB3 815 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 NUSAP1Q9BXS6 441 aaKnown RBP20.89■□□□□ 0.93
SMG8-204ENST00000580498 STK33Q9BYT3 514 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 FBRSQ9HAH7 460 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 PRDM16Q9HAZ2 1276 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 PLCB1Q9NQ66 1216 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 STAP1Q9ULZ2 295 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 RAD54BQ9Y620 910 aa20.89■□□□□ 0.93
SMG8-204ENST00000580498 PLXND1Q9Y4D7 1925 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 F5H5T6 163 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 SYCP2LQ5T4T6 812 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 TTC39BQ5VTQ0 682 aaPredicted RBP20.88■□□□□ 0.93
SMG8-204ENST00000580498 RNF43Q68DV7 783 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 SND1Q7KZF4 910 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMG8-204ENST00000580498 TMEFF1Q8IYR6 380 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 CARNMT1Q8N4J0 409 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMG8-204ENST00000580498 SPAG5Q96R06 1193 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 CPXM1Q96SM3 734 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 VPS16Q9H269 839 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 DDIT4Q9NX09 232 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 FHOD1Q9Y613 1164 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 NUP205Q92621 2012 aa20.88■□□□□ 0.93
SMG8-204ENST00000580498 ABCA7Q8IZY2 2146 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 CEP250Q9BV73 2442 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 WDR87Q6ZQQ6 2873 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 H0Y626 953 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 LSM8O95777 96 aaKnown RBP20.87■□□□□ 0.93
SMG8-204ENST00000580498 ASLP04424 464 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 FYNP06241 537 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 CYP11B1P15538 503 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 HLA-FP30511 346 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 OXTRP30559 389 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 CLCN1P35523 988 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 IL12RB1P42701 662 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 OXCT1P55809 520 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 SLC6A3Q01959 620 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 SFSWAPQ12872 951 aaKnown RBP20.87■□□□□ 0.93
SMG8-204ENST00000580498 LMAN2Q12907 356 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 MS4A13Q5J8X5 152 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 RABGAP1LQ5R372 815 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 SYPL2Q5VXT5 272 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 RNF219Q5W0B1 726 aaPredicted RBP20.87■□□□□ 0.93
SMG8-204ENST00000580498 ERICH1Q86X53 443 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 ZNF677Q86XU0 584 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 SYT12Q8IV01 421 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 DEFB106AQ8N104 65 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 CEP76Q8TAP6 659 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 FOXJ1Q92949 421 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 SIPA1Q96FS4 1042 aa20.87■□□□□ 0.93
SMG8-204ENST00000580498 SLC39A13Q96H72 371 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms