RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 DPH5Q9H2P9 285 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 ASIC3Q9UHC3 531 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 SLC12A6Q9UHW9 1150 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 NEU2Q9Y3R4 380 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 HEY1Q9Y5J3 304 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 SLC12A8A0AV02 714 aa19.18■□□□□ 0.66
PRKCA-203ENST00000578063 LRIG2O94898 1065 aa19.18■□□□□ 0.66
PRKCA-203ENST00000578063 IGLV3-27P01718 113 aa19.18■□□□□ 0.66
PRKCA-203ENST00000578063 MYBL2P10244 700 aa19.18■□□□□ 0.66
PRKCA-203ENST00000578063 NRG1Q02297 640 aaPredicted RBP19.18■□□□□ 0.66
PRKCA-203ENST00000578063 GSPT2Q8IYD1 628 aaKnown RBP19.18■□□□□ 0.66
PRKCA-203ENST00000578063 ELMOD1Q8N336 334 aa19.18■□□□□ 0.66
PRKCA-203ENST00000578063 ATP6V0D2Q8N8Y2 350 aa19.18■□□□□ 0.66
PRKCA-203ENST00000578063 FAM129AQ9BZQ8 928 aa19.18■□□□□ 0.66
PRKCA-203ENST00000578063 NFU1Q9UMS0 254 aa19.18■□□□□ 0.66
PRKCA-203ENST00000578063 CFAP69A5D8W1 941 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 DCLK1O15075 740 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 CLCN4P51793 760 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 XRCC4Q13426 336 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 HLTFQ14527 1009 aaKnown RBP eCLIP19.17■□□□□ 0.664e-6■■■□□ 16.3
PRKCA-203ENST00000578063 PAFAH1B3Q15102 231 aaKnown RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 PABPC1LQ4VXU2 614 aaKnown RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 BEND6Q5SZJ8 279 aaPredicted RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 NUGGCQ68CJ6 796 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 EMBQ6PCB8 327 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 PDZD4Q76G19 769 aaPredicted RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 AENQ8WTP8 325 aaKnown RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 C1orf74Q96LT6 269 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 TMEM121Q9BTD3 319 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 YBX2Q9Y2T7 364 aaKnown RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 H3BNC9 293 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 SGK1O00141 431 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 MOCS2O96007 188 aaPredicted RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 KRT14P02533 472 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 ERCC2P18074 760 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 EPHB2P29323 1055 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 RPL21P46778 160 aaKnown RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 GBE1Q04446 702 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 GPM6BQ13491 265 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 CAMK1Q14012 370 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 TRADDQ15628 312 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 MANEALQ5VSG8 457 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 DDX42Q86XP3 938 aaKnown RBP eCLIP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 CDKL3Q8IVW4 592 aaPredicted RBP19.17■□□□□ 0.66
PRKCA-203ENST00000578063 RSAD2Q8WXG1 361 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 BTN2A3PQ96KV6 586 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 GDF15Q99988 308 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 SIK2Q9H0K1 926 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 PCDH9Q9HC56 1237 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 ETNK2Q9NVF9 386 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 DTLQ9NZJ0 730 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 SNX24Q9Y343 169 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 RAD54BQ9Y620 910 aa19.17■□□□□ 0.66
PRKCA-203ENST00000578063 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.16■□□□□ 0.66
PRKCA-203ENST00000578063 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.16■□□□□ 0.66
PRKCA-203ENST00000578063 H7C0C1 242 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 FGF10O15520 208 aaPredicted RBP19.16■□□□□ 0.66
PRKCA-203ENST00000578063 COCHO43405 550 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 OAS1P00973 400 aaKnown RBP19.16■□□□□ 0.66
PRKCA-203ENST00000578063 HOXC13P31276 330 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 STIP1P31948 543 aaKnown RBP19.16■□□□□ 0.66
PRKCA-203ENST00000578063 SERPINB6P35237 376 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 IRS1P35568 1242 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 ATP5OP48047 213 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 RAB30Q15771 203 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 DARS2Q6PI48 645 aaKnown RBP19.16■□□□□ 0.66
PRKCA-203ENST00000578063 ZC3H18Q86VM9 953 aaKnown RBP19.16■□□□□ 0.66
PRKCA-203ENST00000578063 UNC45BQ8IWX7 931 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 TBC1D31Q96DN5 1066 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 SNF8Q96H20 258 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 OLFM3Q96PB7 478 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 WHRNQ9P202 907 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 SNX10Q9Y5X0 201 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 HS3ST4Q9Y661 456 aa19.16■□□□□ 0.66
PRKCA-203ENST00000578063 CLUHO75153 1309 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 BCLAF3A2AJT9 711 aaKnown RBP19.15■□□□□ 0.66
PRKCA-203ENST00000578063 MFSD11O43934 449 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 F11P03951 625 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 ECHS1P30084 290 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 MLLT6P55198 1093 aaPredicted RBP19.15■□□□□ 0.66
PRKCA-203ENST00000578063 COG7P83436 770 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 CALCOCO2Q13137 446 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 PPM1LQ5SGD2 360 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 BBOF1Q8ND07 529 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 PBX4Q9BYU1 374 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 IL21Q9HBE4 155 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 ZNF334Q9HCZ1 680 aaPredicted RBP19.15■□□□□ 0.66
PRKCA-203ENST00000578063 GRHL1Q9NZI5 618 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 MSRAQ9UJ68 235 aa19.15■□□□□ 0.66
PRKCA-203ENST00000578063 HACD1B0YJ81 288 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 NDC80O14777 642 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 ZNF189O75820 626 aaPredicted RBP19.14■□□□□ 0.66
PRKCA-203ENST00000578063 GGCXP38435 758 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 TRIP13Q15645 432 aaPredicted RBP19.14■□□□□ 0.66
PRKCA-203ENST00000578063 KCTD19Q17RG1 926 aaPredicted RBP19.14■□□□□ 0.66
PRKCA-203ENST00000578063 PIK3R6Q5UE93 754 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 TMEM150AQ86TG1 271 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 CAVIN3Q969G5 261 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 PLD4Q96BZ4 506 aa19.14■□□□□ 0.66
PRKCA-203ENST00000578063 QKIQ96PU8 341 aaKnown RBP eCLIP19.14■□□□□ 0.665e-7■■■□□ 15.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms