RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 C8orf74Q6P047 294 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 ACOT1Q86TX2 421 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 TTC30AQ86WT1 665 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 RHOT1Q8IXI2 618 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 CMTM8Q8IZV2 173 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 PDCL2Q8N4E4 241 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 MMGT1Q8N4V1 131 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 CAMKK1Q8N5S9 505 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 LRRN4CLQ8ND94 238 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 OR10T2Q8NGX3 314 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 RPLP0P6Q8NHW5 317 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 MAIP1Q8WWC4 291 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 TSC1Q92574 1164 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 TWNKQ96RR1 684 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 HPS4Q9NQG7 708 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 ST7Q9NRC1 585 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 ABI2Q9NYB9 513 aaPredicted RBP10.6□□□□□ -0.71
SS18-207ENST00000577636 HMGXB4Q9UGU5 601 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 TSPAN16Q9UKR8 245 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 DSEQ9UL01 958 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 CCL26Q9Y258 94 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 ATG2BQ96BY7 2078 aa10.6□□□□□ -0.71
SS18-207ENST00000577636 GOLGA8SH3BPF8 625 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 KRIT1O00522 736 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 TRDMT1O14717 391 aaKnown RBP10.59□□□□□ -0.71
SS18-207ENST00000577636 KRT3P12035 628 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 CTNNA1P35221 906 aaKnown RBP10.59□□□□□ -0.71
SS18-207ENST00000577636 AARSP49588 968 aaKnown RBP eCLIP10.59□□□□□ -0.71
SS18-207ENST00000577636 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 PDCLQ13371 301 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 MAP9Q49MG5 647 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 ZFYVE27Q5T4F4 411 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 ARHGAP17Q68EM7 881 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 TXNDC8Q6A555 127 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 TMCO3Q6UWJ1 677 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 ZDHHC17Q8IUH5 632 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 CRYBG2Q8N1P7 616 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 THEM5Q8N1Q8 247 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 RASGEF1CQ8N431 466 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 STKLD1Q8NE28 680 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 SPATA18Q8TC71 538 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 STK32AQ8WU08 396 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 ZC3H10Q96K80 434 aaKnown RBP10.59□□□□□ -0.71
SS18-207ENST00000577636 MCEEQ96PE7 176 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 P2RY13Q9BPV8 354 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 FAM83CQ9BQN1 747 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 TPSD1Q9BZJ3 242 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 IL21Q9HBE4 155 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 CHORDC1Q9UHD1 332 aaPredicted RBP10.59□□□□□ -0.71
SS18-207ENST00000577636 TTC7AQ9ULT0 858 aaPredicted RBP10.59□□□□□ -0.71
SS18-207ENST00000577636 L1RE1Q9UN81 338 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 PCDHA3Q9Y5H8 950 aa10.59□□□□□ -0.71
SS18-207ENST00000577636 PDCD11Q14690 1871 aaKnown RBP10.59□□□□□ -0.71
SS18-207ENST00000577636 CNOT1A5YKK6 2376 aaKnown RBP10.59□□□□□ -0.71
SS18-207ENST00000577636 BCLAF3A2AJT9 711 aaKnown RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 TMEM191CA6NGB0 347 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 SIGLEC16A6NMB1 481 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 KHNYNO15037 678 aaKnown RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 DDX3YO15523 660 aaKnown RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 PSTPIP1O43586 416 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 APBB3O95704 486 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 FGGP02679 453 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 PDGFRBP09619 1106 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 ATF6P18850 670 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 DRD1P21728 446 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 PCSK1P29120 753 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 GPD2P43304 727 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 ACADSBP45954 432 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 GPR15P49685 360 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 BCAT1P54687 386 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 RNASE9P60153 205 aaKnown RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 BST2Q10589 180 aaKnown RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 PTP4A2Q12974 167 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 DMC1Q14565 340 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 NAA30Q147X3 362 aaPredicted RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 BRD3Q15059 726 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 HADHQ16836 314 aaKnown RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 C2CD6Q53TS8 623 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 SDHAF4Q5VUM1 108 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 KIAA1211LQ6NV74 962 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 LRRTM3Q86VH5 581 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 WDTC1Q8N5D0 677 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 ANKRD52Q8NB46 1076 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 CCDC26Q8TAB7 109 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 UBA3Q8TBC4 463 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 MRPS31Q92665 395 aaKnown RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 USP13Q92995 863 aaPredicted RBP10.58□□□□□ -0.72
SS18-207ENST00000577636 MS4A14Q96JA4 679 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 NCAPGQ9BPX3 1015 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 MED10Q9BTT4 135 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 ZCWPW1Q9H0M4 648 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 TRPC7Q9HCX4 862 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 FAM49BQ9NUQ9 324 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 TDP1Q9NUW8 608 aa10.58□□□□□ -0.72
SS18-207ENST00000577636 GREB1Q4ZG55 1949 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 PATE3B3GLJ2 98 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 PDE2AO00408 941 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms