RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 GRAMD1CQ8IYS0 662 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 AHI1Q8N157 1196 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 RNF139Q8WU17 664 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 CYB5D2Q8WUJ1 264 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 SKA1Q96BD8 255 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 NXPE2Q96DL1 559 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 FAXDC2Q96IV6 333 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 UBL7Q96S82 380 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 ACE2Q9BYF1 805 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 SGK2Q9HBY8 427 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 ABCB8Q9NUT2 735 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 GGA2Q9UJY4 613 aa12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 HBS1LQ9Y450 684 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-212ENST00000576613 HELZ2Q9BYK8 2649 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 H0Y8X5 98 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 PAPSS1O43252 624 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 LATS1O95835 1130 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 ZBED1O96006 694 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 MYL1P05976 194 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 DLDP09622 509 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 TRIM49P0CI25 452 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 TRIM49CP0CI26 452 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 CDK4P11802 303 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 NR2F2P24468 414 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 CTSKP43235 329 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 TKTL1P51854 596 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 RPS14P62263 151 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 RACK1P63244 317 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 SFSWAPQ12872 951 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 RAB41Q5JT25 222 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 C6orf118Q5T5N4 469 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 ADGRF1Q5T601 910 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 ZNF776Q68DI1 518 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 LAYNQ6UX15 382 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 FMNL3Q8IVF7 1028 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 ZNF366Q8N895 744 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 ZNF557Q8N988 423 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 TMA16Q96EY4 203 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 TMEM176AQ96HP8 235 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 DCBLD2Q96PD2 775 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 TMEM8AQ9HCN3 771 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 PRSS16Q9NQE7 514 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 SERTAD1Q9UHV2 236 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 SCML1Q9UN30 329 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 PCDHA7Q9UN72 937 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 NCKAP1Q9Y2A7 1128 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 PCDHGA1Q9Y5H4 931 aa12.15□□□□□ -0.46
CTDNEP1-212ENST00000576613 KALRNO60229 2985 aa12.15□□□□□ -0.47
CTDNEP1-212ENST00000576613 NUMA1Q14980 2115 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 BPTFQ12830 3046 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 GOLGA4Q13439 2230 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 CABIN1Q9Y6J0 2220 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 K7ELQ4 463 aaPredicted RBP12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 KCNK3O14649 394 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 VILLO15195 856 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 PABPC1P11940 636 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 POLR2EP19388 210 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 RPL13P26373 211 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 IL9RQ01113 521 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 PPP3CAQ08209 521 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 C19orf57Q0VDD7 668 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 MBLAC2Q68D91 279 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 ARHGAP17Q68EM7 881 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 KIAA0895LQ68EN5 471 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 KRT39Q6A163 491 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 PM20D1Q6GTS8 502 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 USP30Q70CQ3 517 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 ADIPOR2Q86V24 386 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 FAM186BQ8IYM0 893 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 ANKRD52Q8NB46 1076 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 GANCQ8TET4 914 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 CCDC47Q96A33 483 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 PAGE5Q96GU1 130 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 ULBP1Q9BZM6 244 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 LRRC4Q9HBW1 653 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 CISHQ9NSE2 258 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 SUN2Q9UH99 717 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 STOML2Q9UJZ1 356 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 PLXNA2O75051 1894 aa12.14□□□□□ -0.47
CTDNEP1-212ENST00000576613 KNL1Q8NG31 2342 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 A0A1B0GTQ1 180 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 TK2O00142 265 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 PLK4O00444 970 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 ENC1O14682 589 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 XPO1O14980 1071 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 RNASEH1O60930 286 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 C1SP09871 688 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 JUPP14923 745 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 ABCB4P21439 1286 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 GTF2H1P32780 548 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 PSMC2P35998 433 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 RAD23BP54727 409 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 ST8SIA6P61647 398 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 NFIL3Q16649 462 aa12.13□□□□□ -0.47
CTDNEP1-212ENST00000576613 FOXD4L6Q3SYB3 417 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms