RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NCEH1Q6PIU2 408 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 LURAP1LQ8IV03 231 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 CPXM2Q8N436 756 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 GOLGA1Q92805 767 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 CYFIP2Q96F07 1278 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 CDK5RAP1Q96SZ6 601 aaKnown RBP17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 HNRNPABQ99729 332 aaKnown RBP17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 MTG2Q9H4K7 406 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 FBRSQ9HAH7 460 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 ABCB8Q9NUT2 735 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 FBXL12Q9NXK8 326 aa17.02■□□□□ 0.32
CTDNEP1-211ENST00000575783 PIEZO2Q9H5I5 2752 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 A0A087X0B3 334 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 SLC12A8A0AV02 714 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 C7P10643 843 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 P4HA1P13674 534 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 MPPE1Q53F39 396 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 RSRC2Q7L4I2 434 aaKnown RBP17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 UNC93AQ86WB7 457 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 ZNF276Q8N554 614 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 PDILTQ8N807 584 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 DCBLD1Q8N8Z6 715 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 ZNF507Q8TCN5 953 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 CLIC5Q9NZA1 410 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 MARCH2Q9P0N8 246 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 SUN2Q9UH99 717 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 STRIP2Q9ULQ0 834 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 PCDHB1Q9Y5F3 818 aa17.01■□□□□ 0.31
CTDNEP1-211ENST00000575783 EIF3DO15371 548 aaKnown RBP eCLIP17■□□□□ 0.313e-16■□□□□ 8.3
CTDNEP1-211ENST00000575783 KLK10O43240 276 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 EXOC3O60645 756 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 VNN1O95497 513 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 MT-CO3P00414 261 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 MPOP05164 745 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 TRIM21P19474 475 aaKnown RBP17■□□□□ 0.31
CTDNEP1-211ENST00000575783 HOXD9P28356 352 aaPredicted RBP17■□□□□ 0.31
CTDNEP1-211ENST00000575783 CEBPZQ03701 1054 aaKnown RBP17■□□□□ 0.31
CTDNEP1-211ENST00000575783 EPM2AIP1Q7L775 607 aaPredicted RBP17■□□□□ 0.31
CTDNEP1-211ENST00000575783 ADIPOR2Q86V24 386 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 DHX40Q8IX18 779 aaKnown RBP17■□□□□ 0.31
CTDNEP1-211ENST00000575783 CACTIN-AS1Q8N1I8 211 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 PLEKHO2Q8TD55 490 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 WFIKKN2Q8TEU8 576 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 RFFLQ8WZ73 363 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 TMX3Q96JJ7 454 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 ZNF578Q96N58 590 aaPredicted RBP17■□□□□ 0.31
CTDNEP1-211ENST00000575783 NEUROG2Q9H2A3 272 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 PABPC3Q9H361 631 aaKnown RBP17■□□□□ 0.31
CTDNEP1-211ENST00000575783 PNPLA8Q9NP80 782 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 SERGEFQ9UGK8 458 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 ADAMTS1Q9UHI8 967 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 SMC3Q9UQE7 1217 aa17■□□□□ 0.31
CTDNEP1-211ENST00000575783 A0A1W2PR77 199 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 LRRC72A6NJI9 287 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 TLR4O00206 839 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 STX6O43752 255 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 RNASEH2AO75792 299 aaKnown RBP16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 C4BPAP04003 597 aaKnown RBP16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 ATP5BP06576 529 aaKnown RBP16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 DLDP09622 509 aaKnown RBP16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 KCNJ12Q14500 433 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 SGSM1Q2NKQ1 1148 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 MBLAC2Q68D91 279 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 SPOPLQ6IQ16 392 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 USP30Q70CQ3 517 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 PRICKLE2Q7Z3G6 844 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 HIC2Q96JB3 615 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 SERAC1Q96JX3 654 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 TWNKQ96RR1 684 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 RSPH9Q9H1X1 276 aaPredicted RBP16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 GGA2Q9UJY4 613 aa16.99■□□□□ 0.31
CTDNEP1-211ENST00000575783 COL5A1P20908 1838 aaPredicted RBP16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 A0A1W2PP55 124 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 RNASEH1O60930 286 aaKnown RBP16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 PABPC1P11940 636 aaKnown RBP16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 POLR2EP19388 210 aaKnown RBP16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 AP3M2P53677 418 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 NXPH1P58417 271 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 E2F1Q01094 437 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 SFMBT2Q5VUG0 894 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 AHI1Q8N157 1196 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 OR2T34Q8NGX1 318 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 KCNE4Q8WWG9 221 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 TTC9Q92623 222 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 TMA16Q96EY4 203 aaKnown RBP16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 MED8Q96G25 268 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 OMDQ99983 421 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 SCML1Q9UN30 329 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 USP3Q9Y6I4 520 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 COL6A6A6NMZ7 2263 aa16.98■□□□□ 0.31
CTDNEP1-211ENST00000575783 CKAP5Q14008 2032 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 MID1O15344 667 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 SDC3O75056 442 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 ACP1P24666 158 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 RXRGP48443 463 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 HARS2P49590 506 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms