RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PANX2Q96RD6 677 aa9.46□□□□□ -0.9
NDE1-207ENST00000573203 NAA15Q9BXJ9 866 aaKnown RBP9.46□□□□□ -0.9
NDE1-207ENST00000573203 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
NDE1-207ENST00000573203 ZDHHC4Q9NPG8 344 aa9.46□□□□□ -0.9
NDE1-207ENST00000573203 TAB2Q9NYJ8 693 aa9.46□□□□□ -0.9
NDE1-207ENST00000573203 EBF1Q9UH73 591 aa9.46□□□□□ -0.9
NDE1-207ENST00000573203 AJAP1Q9UKB5 411 aaPredicted RBP9.46□□□□□ -0.9
NDE1-207ENST00000573203 GPR179Q6PRD1 2367 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 E5RJQ4 531 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 FOXN3O00409 490 aaPredicted RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 CAPN9O14815 690 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 CCP110O43303 1012 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 TSPAN3O60637 253 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 LATS1O95835 1130 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 PENKP01210 267 aaPredicted RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 RETP07949 1114 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 CISD3P0C7P0 127 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 PNMA6AP0CW24 399 aaPredicted RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 FECHP22830 423 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 NTSR1P30989 418 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 KRT9P35527 623 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 RPL34P49207 117 aaKnown RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 SLC11A2P49281 568 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 TBX4P57082 545 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 BPIFB4P59827 614 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 PDCLQ13371 301 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 DRAP1Q14919 205 aaPredicted RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 MPPE1Q53F39 396 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 USP39Q53GS9 565 aaKnown RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 KLHDC7AQ5VTJ3 777 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 SDE2Q6IQ49 451 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 CACNA2D4Q7Z3S7 1137 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 TMEM110Q86TL2 294 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 PASD1Q8IV76 773 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 UNC45BQ8IWX7 931 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 FAM217AQ8IXS0 508 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 FAM160A2Q8N612 972 aaPredicted RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 GPR161Q8N6U8 529 aaKnown RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 NOX5Q96PH1 765 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 TRIM62Q9BVG3 475 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 LSM14BQ9BX40 385 aaKnown RBP9.45□□□□□ -0.9
NDE1-207ENST00000573203 TPSD1Q9BZJ3 242 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 VPS16Q9H269 839 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 BCCIPQ9P287 314 aaKnown RBP eCLIP9.45□□□□□ -0.9
NDE1-207ENST00000573203 CYTH4Q9UIA0 394 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 FBXO10Q9UK96 956 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 PYCARDQ9ULZ3 195 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 USP18Q9UMW8 372 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 STARD13Q9Y3M8 1113 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 CEP83Q9Y592 693 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 FHOD1Q9Y613 1164 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 DMXL1Q9Y485 3027 aa9.45□□□□□ -0.9
NDE1-207ENST00000573203 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 TCRBV21S2A2A0A5A6 115 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 LGALS16A8MUM7 142 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 PRRT4C9JH25 899 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 KIF2AO00139 706 aaPredicted RBP9.44□□□□□ -0.9
NDE1-207ENST00000573203 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
NDE1-207ENST00000573203 ARHGAP6O43182 974 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 PAPSS1O43252 624 aaPredicted RBP9.44□□□□□ -0.9
NDE1-207ENST00000573203 ADAM23O75077 832 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 FYNP06241 537 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 HOXB2P14652 356 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 HNRNPLP14866 589 aaKnown RBP eCLIP9.44□□□□□ -0.9
NDE1-207ENST00000573203 GBP1P32455 592 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 WASP42768 502 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 SNX16P57768 344 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 RING1Q06587 406 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 SPEM2Q0P670 501 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 KCNMA1Q12791 1236 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 ARID5BQ14865 1188 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 ELF2Q15723 593 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 FIGNQ5HY92 759 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 FKBP15Q5T1M5 1219 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 ADGRF1Q5T601 910 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 EGFLAMQ63HQ2 1017 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 NUGGCQ68CJ6 796 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 KBTBD6Q86V97 674 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 SLC47A2Q86VL8 602 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 RASSF3Q86WH2 238 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 CNGA4Q8IV77 575 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 FAM71AQ8IYT1 594 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 CHPFQ8IZ52 775 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 PGBD3Q8N328 593 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 MDGA1Q8NFP4 955 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 DQX1Q8TE96 717 aaKnown RBP9.44□□□□□ -0.9
NDE1-207ENST00000573203 HMGB4Q8WW32 186 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 TMA16Q96EY4 203 aaKnown RBP9.44□□□□□ -0.9
NDE1-207ENST00000573203 P2RY11Q96G91 374 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 PPP1R13BQ96KQ4 1090 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 SERPINB11Q96P15 392 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 NUP58Q9BVL2 599 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 LHX5Q9H2C1 402 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 PDCL3Q9H2J4 239 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 POPDC2Q9HBU9 364 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 NAALADL1Q9UQQ1 740 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 INVSQ9Y283 1065 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 SLC27A6Q9Y2P4 619 aa9.44□□□□□ -0.9
NDE1-207ENST00000573203 THADAQ6YHU6 1953 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms