RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZCWPW1Q9H0M4 648 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 SNX13Q9Y5W8 968 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 HEG1Q9ULI3 1381 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 LRP5O75197 1615 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 MRC1P22897 1456 aa4.75□□□□□ -1.65
NUP88-202ENST00000570937 SCN11AQ9UI33 1791 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 TCRBV5S1A1TA0A578 114 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 CLCA1A8K7I4 914 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 A8MVJ9 347 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 BTBD19C9JJ37 291 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 INO80B-WBP1J3KQ70 363 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 SMIM22K7EJ46 135 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 AGPSO00116 658 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 AREL1O15033 823 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 SPRY2O43597 315 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 CHRM5P08912 532 aaPredicted RBP4.74□□□□□ -1.65
NUP88-202ENST00000570937 CD19P15391 556 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 CERS1P27544 350 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 IL6STP40189 918 aaPredicted RBP4.74□□□□□ -1.65
NUP88-202ENST00000570937 ITGA8P53708 1063 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 SSBP2P81877 361 aaPredicted RBP4.74□□□□□ -1.65
NUP88-202ENST00000570937 ZNF543Q08ER8 600 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 CLCA4Q14CN2 919 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 SAFBQ15424 915 aaKnown RBP eCLIP4.74□□□□□ -1.65
NUP88-202ENST00000570937 C4orf46Q504U0 113 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 MANEALQ5VSG8 457 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 DENND2CQ68D51 928 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 ZNF66Q6ZN08 573 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 USP49Q70CQ1 688 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 RNF44Q7L0R7 432 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 BCDIN3DQ7Z5W3 292 aaKnown RBP4.74□□□□□ -1.65
NUP88-202ENST00000570937 NGEFQ8N5V2 710 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 LINC01465Q8N7H1 131 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 RNF152Q8N8N0 203 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 IQCDQ96DY2 449 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 WDYHV1Q96HA8 205 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 RITA1Q96K30 269 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 FAM227BQ96M60 508 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 ASB2Q96Q27 587 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 SYT17Q9BSW7 474 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 COLEC11Q9BWP8 271 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 GAR1Q9NY12 217 aaKnown RBP4.74□□□□□ -1.65
NUP88-202ENST00000570937 DNAJB11Q9UBS4 358 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 NARFQ9UHQ1 456 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 RIMKLBQ9ULI2 386 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 CORO2BQ9UQ03 480 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 PAPPAQ13219 1627 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 C4BP0C0L5 1744 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 TOGARAM1Q9Y4F4 1720 aa4.74□□□□□ -1.65
NUP88-202ENST00000570937 C5P01031 1676 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 ZNF831Q5JPB2 1677 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 CES2O00748 559 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 APAF1O14727 1248 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 NPHP1O15259 732 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 THAP12O43422 761 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 EXOC3O60645 756 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 TUBB4AP04350 444 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 MMP10P09238 476 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 CDK4P11802 303 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 EIF5P55010 431 aaKnown RBP4.73□□□□□ -1.65
NUP88-202ENST00000570937 EIF4A1P60842 406 aaKnown RBP4.73□□□□□ -1.65
NUP88-202ENST00000570937 LMAN2Q12907 356 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 STK3Q13188 491 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 KCNAB1Q14722 419 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 COBLL1Q53SF7 1204 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 CATSPERGQ6ZRH7 1159 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 C8orf58Q8NAV2 365 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 ATP11CQ8NB49 1132 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 DDB2Q92466 427 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 HIST1H2AAQ96QV6 131 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 MMS19Q96T76 1030 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 ASIC5Q9NY37 505 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 MIS18AQ9NYP9 233 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 NKX1-2Q9UD57 310 aaPredicted RBP4.73□□□□□ -1.65
NUP88-202ENST00000570937 STEAP1Q9UHE8 339 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 RRP7AQ9Y3A4 280 aaKnown RBP4.73□□□□□ -1.65
NUP88-202ENST00000570937 LAS1LQ9Y4W2 734 aaKnown RBP4.73□□□□□ -1.65
NUP88-202ENST00000570937 TNFRSF18Q9Y5U5 241 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 COL15A1P39059 1388 aa4.73□□□□□ -1.65
NUP88-202ENST00000570937 SOS1Q07889 1333 aaPredicted RBP4.72□□□□□ -1.65
NUP88-202ENST00000570937 A0A087WZ62 844 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 DNAJC9-AS1A6NH13 148 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 UBE2Q2LH0YL09 131 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 CHL1O00533 1208 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 PPP6CO00743 305 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 KCNQ3O43525 872 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 TMPRSS11DO60235 418 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 GYS1P13807 737 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 CREB1P16220 341 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 TSHRP16473 764 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 DIO1P49895 249 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 COPAP53621 1224 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 GPR162Q16538 588 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 ST3GAL2Q16842 350 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 CLEC4GQ6UXB4 293 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 C11orf96Q7Z7L8 435 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 PNLDC1Q8NA58 520 aaKnown RBP4.72□□□□□ -1.65
NUP88-202ENST00000570937 PJA1Q8NG27 643 aa4.72□□□□□ -1.65
NUP88-202ENST00000570937 ADAMTS18Q8TE60 1221 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms