RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 SMG5Q9UPR3 1016 aaKnown RBP13.93□□□□□ -0.18
RPAIN-207ENST00000570883 GON4LQ3T8J9 2241 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 SYNJ2BP-COX16A0A087WUM0 186 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 CCDC163A0A0D9SF12 145 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 A0A1W2PQC6 194 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 APBB3O95704 486 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 UNGP13051 313 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-207ENST00000570883 MMP8P22894 467 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 SCNN1AP37088 669 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 SNX16P57768 344 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 RPS24P62847 133 aaKnown RBP13.92□□□□□ -0.18
RPAIN-207ENST00000570883 FANCCQ00597 558 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 NR1I3Q14994 352 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 FILIP1LQ4L180 1135 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 FAM102AQ5T9C2 384 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-207ENST00000570883 E4F1Q66K89 784 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-207ENST00000570883 CACNA2D4Q7Z3S7 1137 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 CAMKK1Q8N5S9 505 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 TSTD1Q8NFU3 115 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 SLC30A5Q8TAD4 765 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 TMA16Q96EY4 203 aaKnown RBP13.92□□□□□ -0.18
RPAIN-207ENST00000570883 NPY6RQ99463 290 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 SYT11Q9BT88 431 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 SLC2A11Q9BYW1 496 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 TTYH3Q9C0H2 523 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 COX16Q9P0S2 106 aa13.92□□□□□ -0.18
RPAIN-207ENST00000570883 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 GOLGA8SH3BPF8 625 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 TBL1XO60907 577 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 CAVIN2O95810 425 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 SERPINC1P01008 464 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 APOEP02649 317 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 HLA-FP30511 346 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 NOS2P35228 1153 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 FLT3P36888 993 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 PBX1P40424 430 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 MATKP42679 507 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 WASP42768 502 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 DGKEP52429 567 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 CENPCQ03188 943 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 PTP4A2Q12974 167 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 MS4A13Q5J8X5 152 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 EOGTQ5NDL2 527 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 MPP7Q5T2T1 576 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 TMEM215Q68D42 235 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 ANO7Q6IWH7 933 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 TRIM72Q6ZMU5 477 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 NUDT18Q6ZVK8 323 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 IRF2BP2Q7Z5L9 587 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 RASSF3Q86WH2 238 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 HJURPQ8NCD3 748 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-207ENST00000570883 MDGA1Q8NFP4 955 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 KCNV2Q8TDN2 545 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 NT5C3BQ969T7 300 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 BTN2A3PQ96KV6 586 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 C11orf70Q9BRQ4 267 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 CD248Q9HCU0 757 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 PIGVQ9NUD9 493 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 EBF1Q9UH73 591 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 TMEM59LQ9UK28 342 aa13.91□□□□□ -0.18
RPAIN-207ENST00000570883 DCHS1Q96JQ0 3298 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 PI4KAP42356 2102 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 A0A1W2PQF6 199 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 LRRC53A6NM62 1247 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 I6L893 689 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 M0QYT0 321 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 AXIN1O15169 862 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 FERP16591 822 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 NTSR1P30989 418 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 RNASE9P60153 205 aaKnown RBP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 NME3Q13232 169 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 LPAL2Q16609 132 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 CLEC16AQ2KHT3 1053 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 RAP1GAP2Q684P5 730 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 TRMT11Q7Z4G4 463 aaKnown RBP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 KIAA0907Q7Z7F0 614 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 PHLDB2Q86SQ0 1253 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 MSANTD4Q8NCY6 345 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 GAB3Q8WWW8 586 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 SORCS1Q8WY21 1168 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 LMLNQ96KR4 655 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 TBCBQ99426 244 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 PRMT1Q99873 361 aaKnown RBP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 GABRG3Q99928 467 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 AGPAT1Q99943 283 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 IRX2Q9BZI1 471 aaPredicted RBP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 TPSD1Q9BZJ3 242 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 ANLNQ9NQW6 1124 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 METTL5Q9NRN9 209 aaKnown RBP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 CACNA2D2Q9NY47 1150 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.9□□□□□ -0.18
RPAIN-207ENST00000570883 MYO6Q9UM54 1294 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 CHD5Q8TDI0 1954 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 NUMA1Q14980 2115 aa13.9□□□□□ -0.18
RPAIN-207ENST00000570883 WASH3PC4AMC7 463 aa13.89□□□□□ -0.19
RPAIN-207ENST00000570883 RPP40O75818 363 aaKnown RBP13.89□□□□□ -0.19
RPAIN-207ENST00000570883 GJB6O95452 261 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms