RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 VSTM1Q6UX27 236 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 TRIM72Q6ZMU5 477 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 CLEC20AQ6ZU45 233 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 CBLL1Q75N03 491 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 Q7L0L9 218 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 DNAAF5Q86Y56 855 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 TMTC1Q8IUR5 882 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 TMEM139Q8IV31 216 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 TCEAL8Q8IYN2 117 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 WDTC1Q8N5D0 677 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 TMEM35BQ8NCS4 154 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 ZMIZ2Q8NF64 920 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 OLIG1Q8TAK6 271 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 SLC7A14Q8TBB6 771 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 GIPC2Q8TF65 315 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 SLC22A17Q8WUG5 538 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 PPP2R3CQ969Q6 453 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 ZNF830Q96NB3 372 aaPredicted RBP8.14□□□□□ -1.11
SMG1-214ENST00000568038 LHX5Q9H2C1 402 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 DMAP1Q9NPF5 467 aaPredicted RBP8.14□□□□□ -1.11
SMG1-214ENST00000568038 MAN1C1Q9NR34 630 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 ST7Q9NRC1 585 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 SPTLC3Q9NUV7 552 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 TAS2R14Q9NYV8 317 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 CYTH4Q9UIA0 394 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 FBXW11Q9UKB1 542 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 MTCH2Q9Y6C9 303 aa8.14□□□□□ -1.11
SMG1-214ENST00000568038 COL4A4P53420 1690 aaPredicted RBP8.14□□□□□ -1.11
SMG1-214ENST00000568038 MYH10P35580 1976 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 TRIOBPQ9H2D6 2365 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 HHLA1C9JL84 531 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 XPO1O14980 1071 aaKnown RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 NRDCO43847 1150 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 LSM8O95777 96 aaKnown RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 FTLP02792 175 aaPredicted RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 C8AP07357 584 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 SETSIPP0DME0 302 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 UNGP13051 313 aaPredicted RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 LCP1P13796 627 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 ITIH2P19823 946 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 CYLC1P35663 651 aaPredicted RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 NSFP46459 744 aaKnown RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 ALDH1A3P47895 512 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 KIF11P52732 1056 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 RPL10AP62906 217 aaKnown RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 TWF1Q12792 350 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 HYAL1Q12794 435 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 IFRD2Q12894 506 aaPredicted RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 ASTE1Q2TB18 679 aaPredicted RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 C2CD6Q53TS8 623 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 PPM1LQ5SGD2 360 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 CCDC122Q5T0U0 273 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 LIN9Q5TKA1 542 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 ACAD10Q6JQN1 1059 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 ALKBH5Q6P6C2 394 aaKnown RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 RAD9BQ6WBX8 426 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 MMS22LQ6ZRQ5 1243 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 EP400NLQ6ZTU2 488 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 CCDC149Q6ZUS6 474 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 GPRIN1Q7Z2K8 1008 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 PHLDB2Q86SQ0 1253 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 PIGZQ86VD9 579 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 ERICH1Q86X53 443 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 CCDC170Q8IYT3 715 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 SLC35F5Q8WV83 523 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 C8orf48Q96LL4 319 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 C11orf70Q9BRQ4 267 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 SYNCQ9H7C4 482 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 CSNK1G1Q9HCP0 422 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 LMCD1Q9NZU5 365 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 TJP2Q9UDY2 1190 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 MAFFQ9ULX9 164 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 MAGED2Q9UNF1 606 aaPredicted RBP8.13□□□□□ -1.11
SMG1-214ENST00000568038 YIPF1Q9Y548 306 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 INSL5Q9Y5Q6 135 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 HCFC2Q9Y5Z7 792 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 ATG2AQ2TAZ0 1938 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 PLXNA3P51805 1871 aa8.13□□□□□ -1.11
SMG1-214ENST00000568038 E5RJQ4 531 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 GIPC1O14908 333 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 CCL16O15467 120 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 LINC01565O15544 149 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 RTN2O75298 545 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 RFPL2O75678 378 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 NDUFA10O95299 355 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 LRG1P02750 347 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 ERBB2P04626 1255 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 CELA3AP09093 270 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 CD8BP10966 210 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 ATF6P18850 670 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 CDH5P33151 784 aaPredicted RBP8.12□□□□□ -1.11
SMG1-214ENST00000568038 TKTL1P51854 596 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 SLC5A3P53794 718 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 EPHB3P54753 998 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 CCZ1BP86790 482 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 CCZ1P86791 482 aaPredicted RBP8.12□□□□□ -1.11
SMG1-214ENST00000568038 ADIGQ0VDE8 80 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 PDCLQ13371 301 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 VEPH1Q14D04 833 aa8.12□□□□□ -1.11
SMG1-214ENST00000568038 LRRC14Q15048 493 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms