RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 SAYSD1Q9NPB0 183 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 ARHGEF38Q9NXL2 777 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 GOLGA6AQ9NYA3 693 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 NINJ2Q9NZG7 142 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 OR12D3Q9UGF7 316 aa12.12□□□□□ -0.47
BBS4-213ENST00000567279 MAGED2Q9UNF1 606 aaPredicted RBP12.12□□□□□ -0.47
BBS4-213ENST00000567279 FAM92AA1XBS5 289 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 HACD1B0YJ81 288 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 TMEM63AO94886 807 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 URODP06132 367 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 VAV1P15498 845 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 CAPN2P17655 700 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 HCAR3P49019 387 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 ZNF135P52742 658 aaPredicted RBP12.11□□□□□ -0.47
BBS4-213ENST00000567279 EFEMP1Q12805 493 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 EIF4EBP2Q13542 120 aaPredicted RBP12.11□□□□□ -0.47
BBS4-213ENST00000567279 PPP2R5DQ14738 602 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 KCTD16Q68DU8 428 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 NAT8LQ8N9F0 302 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 LGMNQ99538 433 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 CLSTN3Q9BQT9 956 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 TMBIM4Q9HC24 238 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 TLR8Q9NR97 1041 aaKnown RBP12.11□□□□□ -0.47
BBS4-213ENST00000567279 RAB6BQ9NRW1 208 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 SPG21Q9NZD8 308 aa12.11□□□□□ -0.47
BBS4-213ENST00000567279 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 TCRBV7S3A2A0A539 114 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 PPP1R12AO14974 1030 aaPredicted RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 PAGE1O75459 146 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 LRIG2O94898 1065 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 DNAJB2P25686 324 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 EPHB2P29323 1055 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 MAGEA4P43358 317 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 TBX4P57082 545 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 DSG1Q02413 1049 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 GAD2Q05329 585 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 AP1B1Q10567 949 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 KYNUQ16719 465 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 FAXCQ5TGI0 409 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 RWDD4Q6NW29 188 aaKnown RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 CENPUQ71F23 418 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 PDZD4Q76G19 769 aaPredicted RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 SH2D3CQ8N5H7 860 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 C9orf72Q96LT7 481 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 OSBPL2Q9H1P3 480 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 LRRC4CQ9HCJ2 640 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.1□□□□□ -0.47
BBS4-213ENST00000567279 COMMD8Q9NX08 183 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 SEPT10Q9P0V9 454 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 PRKAG2Q9UGJ0 569 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 AFF4Q9UHB7 1163 aaKnown RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 XPO7Q9UIA9 1087 aaKnown RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 NR2E3Q9Y5X4 410 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 SMIM23A6NLE4 172 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 TTC4O95801 387 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 SRGAP2BP0DMP2 458 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 EN2P19622 333 aaPredicted RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 SERPINB6P35237 376 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 TUFMP49411 452 aaKnown RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 PSEN1P49768 467 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 ARL4CP56559 192 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 PPIGQ13427 754 aaKnown RBP eCLIP12.1□□□□□ -0.47
BBS4-213ENST00000567279 PDK1Q15118 436 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 PRKD1Q15139 912 aaPredicted RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 HIF1AQ16665 826 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 C10orf120Q5SQS8 335 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 SYCP2LQ5T4T6 812 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 TP53INP2Q8IXH6 220 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 CCNYQ8ND76 341 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 FAM76AQ8TAV0 307 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 HTR3CQ8WXA8 447 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 AUTS2Q8WXX7 1259 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 ATP6V1G3Q96LB4 118 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 HAPLN3Q96S86 360 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 KLC2Q9H0B6 622 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 PRDM12Q9H4Q4 367 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 OLA1Q9NTK5 396 aaKnown RBP12.1□□□□□ -0.47
BBS4-213ENST00000567279 CLIC5Q9NZA1 410 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 BCCIPQ9P287 314 aaKnown RBP eCLIP12.1□□□□□ -0.47
BBS4-213ENST00000567279 TLR6Q9Y2C9 796 aa12.1□□□□□ -0.47
BBS4-213ENST00000567279 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 SMAPO00193 183 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 BANF1O75531 89 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 GCATO75600 419 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 STK10O94804 968 aaKnown RBP12.09□□□□□ -0.47
BBS4-213ENST00000567279 SEC24AO95486 1093 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 APOEP02649 317 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 CA8P35219 290 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 FPGSQ05932 587 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 GABPB1Q06547 395 aaPredicted RBP12.09□□□□□ -0.47
BBS4-213ENST00000567279 PDIA2Q13087 525 aaKnown RBP12.09□□□□□ -0.47
BBS4-213ENST00000567279 KCNJ11Q14654 390 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 FASTKD3Q14CZ7 662 aaKnown RBP12.09□□□□□ -0.47
BBS4-213ENST00000567279 SKIDA1Q1XH10 827 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 HP1BP3Q5SSJ5 553 aaPredicted RBP12.09□□□□□ -0.47
BBS4-213ENST00000567279 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 ARHGEF18Q6ZSZ5 1173 aa12.09□□□□□ -0.47
BBS4-213ENST00000567279 DDX53Q86TM3 631 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms