RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 SLC2A13Q96QE2 648 aa19.3■□□□□ 0.68
MSLN-207ENST00000566549 MECRQ9BV79 373 aa19.3■□□□□ 0.68
MSLN-207ENST00000566549 ARHGAP39Q9C0H5 1083 aa19.3■□□□□ 0.68
MSLN-207ENST00000566549 SLC38A7Q9NVC3 462 aa19.3■□□□□ 0.68
MSLN-207ENST00000566549 PDCD11Q14690 1871 aaKnown RBP19.3■□□□□ 0.68
MSLN-207ENST00000566549 CFAP73A6NFT4 308 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 MGRN1O60291 552 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 DUSP11O75319 330 aaKnown RBP19.29■□□□□ 0.68
MSLN-207ENST00000566549 POMCP01189 267 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 KRT16P08779 473 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 ICE2Q659A1 982 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 C4orf22Q6V702 233 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 AGMOQ6ZNB7 445 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 LRRC39Q96DD0 335 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 TMEM237Q96Q45 408 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 MTG1Q9BT17 334 aaPredicted RBP19.29■□□□□ 0.68
MSLN-207ENST00000566549 VPS11Q9H270 941 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 XAB2Q9HCS7 855 aaKnown RBP19.29■□□□□ 0.68
MSLN-207ENST00000566549 PCMTD2Q9NV79 361 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 IL1RAPL1Q9NZN1 696 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 SNX10Q9Y5X0 201 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 A0A0G2JND7 137 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 A8MUI8 341 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 TRDMT1O14717 391 aaKnown RBP19.29■□□□□ 0.68
MSLN-207ENST00000566549 TOP3BO95985 862 aaKnown RBP19.29■□□□□ 0.68
MSLN-207ENST00000566549 DAOAP59103 153 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 ZNF449Q6P9G9 518 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 SENP6Q9GZR1 1112 aaPredicted RBP19.29■□□□□ 0.68
MSLN-207ENST00000566549 DDIT4Q9NX09 232 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 RCOR3Q9P2K3 495 aaPredicted RBP19.29■□□□□ 0.68
MSLN-207ENST00000566549 PCDHA11Q9Y5I1 949 aa19.29■□□□□ 0.68
MSLN-207ENST00000566549 HACD1B0YJ81 288 aa19.28■□□□□ 0.68
MSLN-207ENST00000566549 MGAT1P26572 445 aa19.28■□□□□ 0.68
MSLN-207ENST00000566549 ALDH3A1P30838 453 aa19.28■□□□□ 0.68
MSLN-207ENST00000566549 TRIM32Q13049 653 aa19.28■□□□□ 0.68
MSLN-207ENST00000566549 STAMBPL1Q96FJ0 436 aa19.28■□□□□ 0.68
MSLN-207ENST00000566549 TSSK1BQ9BXA7 367 aa19.28■□□□□ 0.68
MSLN-207ENST00000566549 RFPL1O75677 317 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 UNC5CO95185 931 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 ATP6V1G2O95670 118 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 CD52P31358 61 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 ADRA1BP35368 520 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 THPOP40225 353 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 SERPINB4P48594 390 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 LHX1P48742 406 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 CCDC15Q0P6D6 951 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 PRKD1Q15139 912 aaPredicted RBP19.27■□□□□ 0.68
MSLN-207ENST00000566549 TIGD5Q53EQ6 642 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 BZW1Q7L1Q6 419 aaKnown RBP19.27■□□□□ 0.68
MSLN-207ENST00000566549 NLRP9Q7RTR0 991 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 BNIPLQ7Z465 357 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 RSPH3Q86UC2 560 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 ZNF567Q8N184 647 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 AGAP3Q96P47 875 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 HAO1Q9UJM8 370 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 CCDC195A0A1B0GUA6 201 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 STK10O94804 968 aaKnown RBP19.27■□□□□ 0.68
MSLN-207ENST00000566549 TROVE2P10155 538 aaKnown RBP eCLIP19.27■□□□□ 0.68
MSLN-207ENST00000566549 ERCC2P18074 760 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 SARNPP82979 210 aaKnown RBP19.27■□□□□ 0.68
MSLN-207ENST00000566549 WASHC5Q12768 1159 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 DPYSQ14117 519 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 CES3Q6UWW8 571 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 ARMC2Q8NEN0 867 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 PGBD4Q96DM1 585 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 TBC1D31Q96DN5 1066 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 ZFYVE28Q9HCC9 887 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 WDR6Q9NNW5 1121 aaKnown RBP19.27■□□□□ 0.68
MSLN-207ENST00000566549 ZNF180Q9UJW8 692 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 INPP5FQ9Y2H2 1132 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 NUMBLQ9Y6R0 609 aa19.27■□□□□ 0.68
MSLN-207ENST00000566549 HMX2A2RU54 273 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 FAM159BA6NKW6 160 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 MGEA5O60502 916 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 DCTN3O75935 186 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 KRT38O76015 456 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 TOMM70O94826 608 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 CBX6O95503 412 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 DHRS4L1P0CG22 281 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 FDFT1P37268 417 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 BRCC3P46736 316 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 PDK1Q15118 436 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 TAF1BQ53T94 588 aaPredicted RBP19.26■□□□□ 0.67
MSLN-207ENST00000566549 LGSNQ5TDP6 509 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 ASRGL1Q7L266 308 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 PID1Q7Z2X4 250 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 MTDHQ86UE4 582 aaKnown RBP19.26■□□□□ 0.67
MSLN-207ENST00000566549 CEP57Q86XR8 500 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 PSTKQ8IV42 348 aaKnown RBP19.26■□□□□ 0.67
MSLN-207ENST00000566549 HACE1Q8IYU2 909 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 TRIB2Q92519 343 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 OXNAD1Q96HP4 312 aaPredicted RBP19.26■□□□□ 0.67
MSLN-207ENST00000566549 NOD2Q9HC29 1040 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 GABRQQ9UN88 632 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 MAGED2Q9UNF1 606 aaPredicted RBP19.26■□□□□ 0.67
MSLN-207ENST00000566549 C2orf71A6NGG8 1288 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 PPP1R12AO14974 1030 aaPredicted RBP19.26■□□□□ 0.67
MSLN-207ENST00000566549 USP12O75317 370 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 B3GAT3O94766 335 aa19.26■□□□□ 0.67
MSLN-207ENST00000566549 IGHA2P01877 340 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms