RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SNX10Q9Y5X0 201 aa8.47□□□□□ -1.05
CDH13-208ENST00000566333 DUSP10Q9Y6W6 482 aa8.47□□□□□ -1.05
CDH13-208ENST00000566333 GOLGA6L7A0A1B0GV03 622 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 TRDMT1O14717 391 aaKnown RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 SLC9A3R1O14745 358 aaPredicted RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 HOXC11O43248 304 aaPredicted RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 BUB1BO60566 1050 aaPredicted RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 PROSCO94903 275 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 IPO7O95373 1038 aaKnown RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 NFATC1O95644 943 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 F9P00740 461 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 PENKP01210 267 aaPredicted RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 SLC2A3P11169 496 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 HOXD9P28356 352 aaPredicted RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 MIPP30301 263 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 PCK1P35558 622 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 ARHGAP25P42331 645 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 SOX9P48436 509 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 SLC11A2P49281 568 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 MESP2Q0VG99 397 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 SEMA3BQ13214 749 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 RUNX3Q13761 415 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 PIGHQ14442 188 aaPredicted RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 DHCR24Q15392 516 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 ADGRF1Q5T601 910 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 FYB2Q5VWT5 728 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 RAP1GAP2Q684P5 730 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 TXNRD3NBQ6F5E7 133 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 CC2D1AQ6P1N0 951 aaPredicted RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 RHBDF2Q6PJF5 856 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 TXNDC11Q6PKC3 985 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 CHSY1Q86X52 802 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 TMEM25Q86YD3 366 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 ETFBKMTQ8IXQ9 262 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 YAF2Q8IY57 180 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 ADGRG2Q8IZP9 1017 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 PHTF2Q8N3S3 785 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 CPA6Q8N4T0 437 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 IRF7Q92985 503 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 ZNF830Q96NB3 372 aaPredicted RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 SNRNP25Q9BV90 132 aaKnown RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 MAGEB5Q9BZ81 275 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 GOLPH3Q9H4A6 298 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 WDCPQ9H6R7 721 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 ECT2Q9H8V3 914 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 SPHK2Q9NRA0 654 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 HEBP1Q9NRV9 189 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDH13-208ENST00000566333 THG1LQ9NWX6 298 aaKnown RBP8.46□□□□□ -1.06
CDH13-208ENST00000566333 IP6K2Q9UHH9 426 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 ZNF510Q9Y2H8 683 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 HS3ST4Q9Y661 456 aa8.46□□□□□ -1.06
CDH13-208ENST00000566333 CACNA1IQ9P0X4 2223 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 EML5Q05BV3 1969 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 IGLV3-10A0A075B6K4 115 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 KRBA1A5PL33 1030 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 NEDD8-MDP1E9PL57 170 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 SPECC1L-ADORA2AF8WAN1 911 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 FAM72CH0Y354 149 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 MYO1FO00160 1098 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 DCXO43602 365 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 CACNG3O60359 315 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 ADH1CP00326 375 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 PTMAP06454 111 aaKnown RBP8.45□□□□□ -1.06
CDH13-208ENST00000566333 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
CDH13-208ENST00000566333 ADH5P11766 374 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 TACR2P21452 398 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 HOXC13P31276 330 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 CTHP32929 405 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 GJA4P35212 333 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 ADRA1BP35368 520 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 OPRD1P41143 372 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 TAS2R40P59535 323 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 RPS24P62847 133 aaKnown RBP8.45□□□□□ -1.06
CDH13-208ENST00000566333 KRT83P78385 493 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 ZXDAP98168 799 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 NRG1Q02297 640 aaPredicted RBP8.45□□□□□ -1.06
CDH13-208ENST00000566333 ACAP1Q15027 740 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 MLF2Q15773 248 aaPredicted RBP8.45□□□□□ -1.06
CDH13-208ENST00000566333 CA9Q16790 459 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 ITPRIPL2Q3MIP1 535 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 C5orf22Q49AR2 442 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 FAM72AQ5TYM5 149 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 FAM72DQ6L9T8 149 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 C11orf63Q6NUN7 778 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 FBXL22Q6P050 247 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 TPRG1Q6ZUI0 275 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 SND1Q7KZF4 910 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDH13-208ENST00000566333 C14orf80Q86SX3 495 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 KIAA1328Q86T90 577 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 FAM72BQ86X60 149 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 CIR1Q86X95 450 aaPredicted RBP8.45□□□□□ -1.06
CDH13-208ENST00000566333 UBALD2Q8IYN6 164 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 ZNF687Q8N1G0 1237 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 PYROXD2Q8N2H3 581 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 ATP6V0D2Q8N8Y2 350 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 LRRC57Q8N9N7 239 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 TTC8Q8TAM2 541 aa8.45□□□□□ -1.06
CDH13-208ENST00000566333 WFDC5Q8TCV5 224 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms