RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 SLC2A11Q9BYW1 496 aa18.34■□□□□ 0.53
MSLN-206ENST00000566269 NUCKS1Q9H1E3 243 aaKnown RBP18.34■□□□□ 0.53
MSLN-206ENST00000566269 STARD13Q9Y3M8 1113 aa18.34■□□□□ 0.53
MSLN-206ENST00000566269 CCDC163A0A0D9SF12 145 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 GFRA2O00451 464 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 HRO43593 1189 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 ADAM23O75077 832 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 ALDH1A2O94788 518 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 CYP1A1P04798 512 aaPredicted RBP18.33■□□□□ 0.52
MSLN-206ENST00000566269 HOXB2P14652 356 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 HNRNPLP14866 589 aaKnown RBP eCLIP18.33■□□□□ 0.52
MSLN-206ENST00000566269 NTSR1P30989 418 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 CNR2P34972 360 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 NOS2P35228 1153 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 PIK3R6Q5UE93 754 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 SDE2Q6IQ49 451 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 TMEM92Q6UXU6 159 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 ATP6V0D2Q8N8Y2 350 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 KCNV2Q8TDN2 545 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 BTN2A3PQ96KV6 586 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 PRICKLE1Q96MT3 831 aaPredicted RBP18.33■□□□□ 0.52
MSLN-206ENST00000566269 C11orf70Q9BRQ4 267 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 TPSD1Q9BZJ3 242 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 CIPCQ9C0C6 399 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 POLMQ9NP87 494 aaPredicted RBP18.33■□□□□ 0.52
MSLN-206ENST00000566269 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.33■□□□□ 0.52
MSLN-206ENST00000566269 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.33■□□□□ 0.52
MSLN-206ENST00000566269 STIM2Q9P246 746 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 BCCIPQ9P287 314 aaKnown RBP eCLIP18.33■□□□□ 0.52
MSLN-206ENST00000566269 NCDNQ9UBB6 729 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 SLC12A6Q9UHW9 1150 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 XPO7Q9UIA9 1087 aaKnown RBP18.33■□□□□ 0.52
MSLN-206ENST00000566269 HCN2Q9UL51 889 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 STAP1Q9ULZ2 295 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 SPAG17Q6Q759 2223 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 SDK1Q7Z5N4 2213 aa18.33■□□□□ 0.52
MSLN-206ENST00000566269 EML5Q05BV3 1969 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 A0A1W2PQC6 194 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 TCRBV21S2A2A0A5A6 115 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 M0QYT0 321 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 RPP40O75818 363 aaKnown RBP18.32■□□□□ 0.52
MSLN-206ENST00000566269 CCDC172P0C7W6 258 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 SLC2A3P11169 496 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 FERP16591 822 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 ABCB4P21439 1286 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 CCR1P32246 355 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 SCNN1AP37088 669 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 MATKP42679 507 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 NSFP46459 744 aaKnown RBP18.32■□□□□ 0.52
MSLN-206ENST00000566269 SULT1E1P49888 294 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 FANCCQ00597 558 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 RAP1GAP2Q684P5 730 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 SLC30A5Q8TAD4 765 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 UCMAQ8WVF2 138 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 ERLEC1Q96DZ1 483 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 ACOX2Q99424 681 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 ABCB8Q9NUT2 735 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 CACNA2D2Q9NY47 1150 aa18.32■□□□□ 0.52
MSLN-206ENST00000566269 TACR2P21452 398 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 HLA-FP30511 346 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 RPS24P62847 133 aaKnown RBP18.31■□□□□ 0.52
MSLN-206ENST00000566269 CLEC16AQ2KHT3 1053 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 MS4A13Q5J8X5 152 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.31■□□□□ 0.52
MSLN-206ENST00000566269 PHLDB2Q86SQ0 1253 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 MFN1Q8IWA4 741 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 LGI2Q8N0V4 545 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 MDGA1Q8NFP4 955 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 HMGB4Q8WW32 186 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 GAB3Q8WWW8 586 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 BAP1Q92560 729 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 RUBCNQ92622 972 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 MYEOVQ96EZ4 313 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 PCDHB18PQ96TA0 734 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 AGPAT1Q99943 283 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 IRX2Q9BZI1 471 aaPredicted RBP18.31■□□□□ 0.52
MSLN-206ENST00000566269 METTL5Q9NRN9 209 aaKnown RBP18.31■□□□□ 0.52
MSLN-206ENST00000566269 RRN3Q9NYV6 651 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 EBF1Q9UH73 591 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 GGA2Q9UJY4 613 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 GMEB2Q9UKD1 530 aa18.31■□□□□ 0.52
MSLN-206ENST00000566269 LRRC53A6NM62 1247 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 KCNU1A8MYU2 1149 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 F5H5T6 163 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 MMP8P22894 467 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 FLT3P36888 993 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 EIF4EBP2Q13542 120 aaPredicted RBP18.3■□□□□ 0.52
MSLN-206ENST00000566269 CDH18Q13634 790 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 NR1I3Q14994 352 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 EIF4HQ15056 248 aaKnown RBP18.3■□□□□ 0.52
MSLN-206ENST00000566269 ASIC2Q16515 512 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 MPP7Q5T2T1 576 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 OTUD1Q5VV17 481 aaPredicted RBP18.3■□□□□ 0.52
MSLN-206ENST00000566269 SND1Q7KZF4 910 aaKnown RBP eCLIP18.3■□□□□ 0.523e-9■■■■□ 19.5
MSLN-206ENST00000566269 CCDC117Q8IWD4 279 aaPredicted RBP18.3■□□□□ 0.52
MSLN-206ENST00000566269 CFAP52Q8N1V2 620 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 PGBD3Q8N328 593 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 CARNMT1Q8N4J0 409 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 WFDC5Q8TCV5 224 aa18.3■□□□□ 0.52
MSLN-206ENST00000566269 WFIKKN2Q8TEU8 576 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms