RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 TBL1XO60907 577 aa29.36■■■□□ 2.29
NME3-203ENST00000563367 APOEP02649 317 aa29.36■■■□□ 2.29
NME3-203ENST00000563367 RNASE9P60153 205 aaKnown RBP29.36■■■□□ 2.29
NME3-203ENST00000563367 RNF43Q68DV7 783 aa29.36■■■□□ 2.29
NME3-203ENST00000563367 MDGA1Q8NFP4 955 aa29.36■■■□□ 2.29
NME3-203ENST00000563367 RUBCNQ92622 972 aa29.36■■■□□ 2.29
NME3-203ENST00000563367 PCDHB18PQ96TA0 734 aa29.36■■■□□ 2.29
NME3-203ENST00000563367 ADAM33Q9BZ11 813 aa29.36■■■□□ 2.29
NME3-203ENST00000563367 CALCOCO1Q9P1Z2 691 aa29.36■■■□□ 2.29
NME3-203ENST00000563367 A0A1B0GTH6 734 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 RPP40O75818 363 aaKnown RBP29.35■■■□□ 2.29
NME3-203ENST00000563367 HLA-FP30511 346 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 NOS2P35228 1153 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 FILIP1LQ4L180 1135 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 OTUD1Q5VV17 481 aaPredicted RBP29.35■■■□□ 2.29
NME3-203ENST00000563367 TMEM215Q68D42 235 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 CEP68Q76N32 757 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 CACNA2D4Q7Z3S7 1137 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 ANKS1BQ7Z6G8 1248 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 CHPFQ8IZ52 775 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 WFDC5Q8TCV5 224 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 DDX50Q9BQ39 737 aaKnown RBP29.35■■■□□ 2.29
NME3-203ENST00000563367 IRX2Q9BZI1 471 aaPredicted RBP29.35■■■□□ 2.29
NME3-203ENST00000563367 TPSD1Q9BZJ3 242 aa29.35■■■□□ 2.29
NME3-203ENST00000563367 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.35■■■□□ 2.29
NME3-203ENST00000563367 KCNU1A8MYU2 1149 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 WASH3PC4AMC7 463 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 TFE3P19532 575 aaPredicted RBP29.34■■■□□ 2.29
NME3-203ENST00000563367 GBP1P32455 592 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 MATKP42679 507 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 RPS24P62847 133 aaKnown RBP29.34■■■□□ 2.29
NME3-203ENST00000563367 SKOR2Q2VWA4 1001 aaPredicted RBP29.34■■■□□ 2.29
NME3-203ENST00000563367 MS4A13Q5J8X5 152 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 MPP7Q5T2T1 576 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 FAM102AQ5T9C2 384 aaPredicted RBP29.34■■■□□ 2.29
NME3-203ENST00000563367 SLC30A5Q8TAD4 765 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 BTN2A3PQ96KV6 586 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 HINFPQ9BQA5 517 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 POLMQ9NP87 494 aaPredicted RBP29.34■■■□□ 2.29
NME3-203ENST00000563367 CACNA2D2Q9NY47 1150 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.34■■■□□ 2.29
NME3-203ENST00000563367 STIM2Q9P246 746 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 NCDNQ9UBB6 729 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 RAB23Q9ULC3 237 aa29.34■■■□□ 2.29
NME3-203ENST00000563367 A0A1W2PQF6 199 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 GOLGA8SH3BPF8 625 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 HOXB2P14652 356 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 SCNN1AP37088 669 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 NME3Q13232 169 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 RAP1GAP2Q684P5 730 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 MMS22LQ6ZRQ5 1243 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 CFAP52Q8N1V2 620 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 HJURPQ8NCD3 748 aaPredicted RBP29.33■■■□□ 2.29
NME3-203ENST00000563367 SORCS1Q8WY21 1168 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 BAP1Q92560 729 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 ERLEC1Q96DZ1 483 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 NPY6RQ99463 290 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 GABRG3Q99928 467 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 CD248Q9HCU0 757 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 ELOVL2Q9NXB9 296 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 INVSQ9Y283 1065 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 THADAQ6YHU6 1953 aa29.33■■■□□ 2.29
NME3-203ENST00000563367 PLXND1Q9Y4D7 1925 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 TCRBV21S2A2A0A5A6 115 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 M0QYT0 321 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 DCLK1O15075 740 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 UNGP13051 313 aaPredicted RBP29.32■■■□□ 2.28
NME3-203ENST00000563367 NR1I3Q14994 352 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 LAIR1Q6GTX8 287 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 TRNP1Q6NT89 227 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 KIAA1211LQ6NV74 962 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 TRIM72Q6ZMU5 477 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 KIAA0907Q7Z7F0 614 aaPredicted RBP29.32■■■□□ 2.28
NME3-203ENST00000563367 KBTBD6Q86V97 674 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 FAM160A2Q8N612 972 aaPredicted RBP29.32■■■□□ 2.28
NME3-203ENST00000563367 ATP6V0D2Q8N8Y2 350 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 MSANTD4Q8NCY6 345 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 HMGB4Q8WW32 186 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 ABCB8Q9NUT2 735 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 THAP10Q9P2Z0 257 aaPredicted RBP29.32■■■□□ 2.28
NME3-203ENST00000563367 RAD54BQ9Y620 910 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 CKAP5Q14008 2032 aa29.32■■■□□ 2.28
NME3-203ENST00000563367 ALDH1A2O94788 518 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 SERPINC1P01008 464 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 TACR2P21452 398 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 MMP8P22894 467 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 CCR1P32246 355 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 SDE2Q6IQ49 451 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 LGI2Q8N0V4 545 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.31■■■□□ 2.28
NME3-203ENST00000563367 RNF34Q969K3 372 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 NT5C3BQ969T7 300 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 PRMT1Q99873 361 aaKnown RBP29.31■■■□□ 2.28
NME3-203ENST00000563367 CIPCQ9C0C6 399 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 TMEM59LQ9UK28 342 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 STON1Q9Y6Q2 735 aa29.31■■■□□ 2.28
NME3-203ENST00000563367 A0A1W2PQC6 194 aa29.3■■■□□ 2.28
NME3-203ENST00000563367 SLC2A3P11169 496 aa29.3■■■□□ 2.28
NME3-203ENST00000563367 CD70P32970 193 aa29.3■■■□□ 2.28
NME3-203ENST00000563367 FLT3P36888 993 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms