RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 GATA6Q92908 595 aa16.41■□□□□ 0.22
CLK3-211ENST00000563297 NUP58Q9BVL2 599 aa16.41■□□□□ 0.22
CLK3-211ENST00000563297 MAN1B1Q9UKM7 699 aa16.41■□□□□ 0.22
CLK3-211ENST00000563297 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLK3-211ENST00000563297 AKAP13Q12802 2813 aa16.41■□□□□ 0.22
CLK3-211ENST00000563297 IGF2RP11717 2491 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 A0A1B0GTW7 788 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 PPP1R3GB7ZBB8 358 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 HYAL3O43820 417 aaPredicted RBP16.4■□□□□ 0.22
CLK3-211ENST00000563297 IGLV3-27P01718 113 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 ACADMP11310 421 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 SGSHP51688 502 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 NUCB2P80303 420 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 CAMK2GQ13555 558 aaPredicted RBP16.4■□□□□ 0.22
CLK3-211ENST00000563297 CCDC40Q4G0X9 1142 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 DCAF12L1Q5VU92 463 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 TTI2Q6NXR4 508 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 CHST9Q7L1S5 443 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 OR2T3Q8NH03 318 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 WFIKKN2Q8TEU8 576 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 CLEC4CQ8WTT0 213 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 CYB5D2Q8WUJ1 264 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 IRGQQ8WZA9 623 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 CAMK1GQ96NX5 476 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 TMEM245Q9H330 911 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 ABCB8Q9NUT2 735 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 ZMIZ1Q9ULJ6 1067 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 PLA2G4CQ9UP65 541 aa16.4■□□□□ 0.22
CLK3-211ENST00000563297 GOLGA6L7A0A1B0GV03 622 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 MEI4A8MW99 385 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 P4HA2O15460 535 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 SH3BP5O60239 455 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 LTFP02788 710 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 C7P10643 843 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 BMP6P22004 513 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 BRD2P25440 801 aaKnown RBP16.39■□□□□ 0.21
CLK3-211ENST00000563297 PPP1R2P41236 205 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 GRIK2Q13002 908 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 STILQ15468 1287 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 PTPRNQ16849 979 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 PIK3R6Q5UE93 754 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 KLHL10Q6JEL2 608 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 RFWD3Q6PCD5 774 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 RRAGAQ7L523 313 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 ZNF366Q8N895 744 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLK3-211ENST00000563297 EHBP1Q8NDI1 1231 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 HSFY1Q96LI6 401 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 ZDHHC5Q9C0B5 715 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 MIR1-1HGQ9H1L0 117 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 NEUROG3Q9Y4Z2 214 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 ZFHX4Q86UP3 3567 aa16.39■□□□□ 0.21
CLK3-211ENST00000563297 ASPMQ8IZT6 3477 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 M0QYV0 167 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 ACSL4O60488 711 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 FYNP06241 537 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 PABPC1P11940 636 aaKnown RBP16.38■□□□□ 0.21
CLK3-211ENST00000563297 SLC6A4P31645 630 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 TBX4P57082 545 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 RING1Q06587 406 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 CETN1Q12798 172 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 HNRNPDQ14103 355 aaKnown RBP16.38■□□□□ 0.21
CLK3-211ENST00000563297 FNDC3BQ53EP0 1204 aaKnown RBP16.38■□□□□ 0.21
CLK3-211ENST00000563297 FAM133BQ5BKY9 247 aaKnown RBP16.38■□□□□ 0.21
CLK3-211ENST00000563297 MPP7Q5T2T1 576 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 MBLAC2Q68D91 279 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 FOXR2Q6PJQ5 311 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 FAM124AQ86V42 546 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 CACUL1Q86Y37 369 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 ARHGEF19Q8IW93 802 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 ZCCHC9Q8N567 271 aaKnown RBP16.38■□□□□ 0.21
CLK3-211ENST00000563297 C1orf216Q8TAB5 229 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 WFDC5Q8TCV5 224 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 NELFBQ8WX92 580 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 AZIN2Q96A70 460 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 IRX2Q9BZI1 471 aaPredicted RBP16.38■□□□□ 0.21
CLK3-211ENST00000563297 EIF2B4Q9UI10 523 aaKnown RBP16.38■□□□□ 0.21
CLK3-211ENST00000563297 KLK13Q9UKR3 277 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 MSRB2Q9Y3D2 182 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
CLK3-211ENST00000563297 H0Y626 953 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 BCAT2O15382 392 aaPredicted RBP16.37■□□□□ 0.21
CLK3-211ENST00000563297 TBL1XO60907 577 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 FBXO21O94952 628 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 TRIM16O95361 564 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 DLDP09622 509 aaKnown RBP16.37■□□□□ 0.21
CLK3-211ENST00000563297 CD70P32970 193 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 ACSL1P33121 698 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 RPL34P49207 117 aaKnown RBP16.37■□□□□ 0.21
CLK3-211ENST00000563297 SLC11A2P49281 568 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 BNC1Q01954 994 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 KCNH2Q12809 1159 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 BECN1Q14457 450 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 TRIP6Q15654 476 aaKnown RBP16.37■□□□□ 0.21
CLK3-211ENST00000563297 NUGGCQ68CJ6 796 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 NADSYN1Q6IA69 706 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 TRIM59Q8IWR1 403 aa16.37■□□□□ 0.21
CLK3-211ENST00000563297 SCUBE3Q8IX30 993 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms