RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 PLXNA3P51805 1871 aa18.64■□□□□ 0.58
COMMD4-208ENST00000563220 GOLGA6BA6NDN3 693 aa18.64■□□□□ 0.57
COMMD4-208ENST00000563220 KCNN4O15554 427 aa18.64■□□□□ 0.57
COMMD4-208ENST00000563220 HMGA1P17096 107 aaKnown RBP18.64■□□□□ 0.57
COMMD4-208ENST00000563220 CFAP58Q5T655 872 aa18.64■□□□□ 0.57
COMMD4-208ENST00000563220 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-208ENST00000563220 RTP4Q96DX8 246 aa18.64■□□□□ 0.57
COMMD4-208ENST00000563220 FCRL2Q96LA5 508 aaPredicted RBP18.64■□□□□ 0.57
COMMD4-208ENST00000563220 EPAS1Q99814 870 aa18.64■□□□□ 0.57
COMMD4-208ENST00000563220 UBE2OQ9C0C9 1292 aaKnown RBP18.64■□□□□ 0.57
COMMD4-208ENST00000563220 RXFP1Q9HBX9 757 aa18.64■□□□□ 0.57
COMMD4-208ENST00000563220 FNIP2Q9P278 1114 aa18.64■□□□□ 0.57
COMMD4-208ENST00000563220 YIPF1Q9Y548 306 aa18.64■□□□□ 0.57
COMMD4-208ENST00000563220 SYF2O95926 243 aaKnown RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 CTSAP10619 480 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 TBX4P57082 545 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 SLC45A4Q5BKX6 768 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 C10orf120Q5SQS8 335 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 RNASEH2BQ5TBB1 312 aaKnown RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 GPR65Q8IYL9 337 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 TAB3Q8N5C8 712 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 UBLCP1Q8WVY7 318 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 EPB41L4BQ9H329 900 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 ACBD3Q9H3P7 528 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 CCSER2Q9H7U1 834 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 NEU3Q9UQ49 428 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 LAMA2P24043 3122 aaKnown RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 MYO16Q9Y6X6 1858 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 CFAP69A5D8W1 941 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 MOCS2O96007 188 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 SRGAP2BP0DMP2 458 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 ATP2A2P16615 1042 aaKnown RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 EPHB2P29323 1055 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 ZNF135P52742 658 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 PMS2P54278 862 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 UBAP2Q5T6F2 1119 aaKnown RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 CCDC25Q86WR0 208 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 CDKL3Q8IVW4 592 aaPredicted RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 PHOSPHO2Q8TCD6 241 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 QKIQ96PU8 341 aaKnown RBP eCLIP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 LGMNQ99538 433 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 SEMA4AQ9H3S1 761 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 OLA1Q9NTK5 396 aaKnown RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 DNAJC17Q9NVM6 304 aaKnown RBP18.63■□□□□ 0.57
COMMD4-208ENST00000563220 MARCH2Q9P0N8 246 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 NR2E3Q9Y5X4 410 aa18.63■□□□□ 0.57
COMMD4-208ENST00000563220 H0YGN5 161 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 TLL1O43897 1013 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 CNPP09543 421 aaKnown RBP18.62■□□□□ 0.57
COMMD4-208ENST00000563220 CSH1P0DML2 217 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 CSH2P0DML3 217 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 ALDH1A3P47895 512 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 BZW1Q7L1Q6 419 aaKnown RBP18.62■□□□□ 0.57
COMMD4-208ENST00000563220 MIB1Q86YT6 1006 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 NPWQ8N729 165 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 CPT1BQ92523 772 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 PLAAQ9Y263 795 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 FARP1Q9Y4F1 1045 aaPredicted RBP18.62■□□□□ 0.57
COMMD4-208ENST00000563220 HS3ST4Q9Y661 456 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 NFS1Q9Y697 457 aa18.62■□□□□ 0.57
COMMD4-208ENST00000563220 TLR5O60602 858 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 SPATA31D3P0C874 917 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 VAV1P15498 845 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 ELF1P32519 619 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 MLLT6P55198 1093 aaPredicted RBP18.61■□□□□ 0.57
COMMD4-208ENST00000563220 TWF1Q12792 350 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 SLMAPQ14BN4 828 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 TRIP4Q15650 581 aaPredicted RBP18.61■□□□□ 0.57
COMMD4-208ENST00000563220 MANEALQ5VSG8 457 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 ANKRD22Q5VYY1 191 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 SPATA31D4Q6ZUB0 917 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 C14orf80Q86SX3 495 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 TCEAL8Q8IYN2 117 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 TFB1MQ8WVM0 346 aaKnown RBP18.61■□□□□ 0.57
COMMD4-208ENST00000563220 MYRFLQ96LU7 910 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 STK39Q9UEW8 545 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 GREB1Q4ZG55 1949 aa18.61■□□□□ 0.57
COMMD4-208ENST00000563220 SLC12A8A0AV02 714 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 ZNF840PA6NDX5 716 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 HACD1B0YJ81 288 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 PRRG1O14668 218 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 CXCL14O95715 111 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 OAS2P29728 719 aaKnown RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 CA8P35219 290 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 MORF4L2Q15014 288 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 PIK3R6Q5UE93 754 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 SNX30Q5VWJ9 437 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 ZCCHC9Q8N567 271 aaKnown RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 OR2W6PQ8NHA6 318 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 PRCCQ92733 491 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 ZNF512Q96ME7 567 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 PABPC3Q9H361 631 aaKnown RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 PRDM12Q9H4Q4 367 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 TMEM51Q9NW97 253 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 ZNF638Q14966 1978 aaKnown RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 KIAA1671Q9BY89 1806 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 TCRBV7S3A2A0A539 114 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 SLC2A3P11169 496 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms