RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 GRK5P34947 590 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 AARSP49588 968 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC00557-201ENST00000563184 AGTR2P50052 363 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 ACTR2P61160 394 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 TGFB2P61812 414 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 RNASELQ05823 741 aaKnown RBP6.33□□□□□ -1.4
LINC00557-201ENST00000563184 PDCLQ13371 301 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 DCTN1Q14203 1278 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 ANKS1BQ7Z6G8 1248 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 C2CD5Q86YS7 1000 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 LAS2Q8IYD9 372 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 SLC2A12Q8TD20 617 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 CLEC4CQ8WTT0 213 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 AKAP1Q92667 903 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC00557-201ENST00000563184 RITA1Q96K30 269 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 HS6ST2Q96MM7 605 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 ADGRE3Q9BY15 652 aa6.33□□□□□ -1.4
LINC00557-201ENST00000563184 AOX1Q06278 1338 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 BTBD19C9JJ37 291 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 IGLV2-14P01704 120 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 TFRCP02786 760 aaKnown RBP6.32□□□□□ -1.4
LINC00557-201ENST00000563184 IGFBP2P18065 325 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 STAT6P42226 847 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 MAPK9P45984 424 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 TFF2Q03403 129 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 SLC14A1Q13336 389 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 KCNB1Q14721 858 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 FAM110CQ1W6H9 321 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 PROSER3Q2NL68 480 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 TBRG1Q3YBR2 411 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 WDR93Q6P2C0 686 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 TMEM65Q6PI78 240 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 SERPINA13PQ6UXR4 307 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 CPOQ8IVL8 374 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 ADAMTS18Q8TE60 1221 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 GOLGA1Q92805 767 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 CCDC17Q96LX7 622 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 PYM1Q9BRP8 204 aaKnown RBP6.32□□□□□ -1.4
LINC00557-201ENST00000563184 CHODLQ9H9P2 273 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 B3GNT3Q9Y2A9 372 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 PCDHA10Q9Y5I2 948 aa6.32□□□□□ -1.4
LINC00557-201ENST00000563184 WDR33Q9C0J8 1336 aaKnown RBP6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3DA0A087WVF3 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3IA0A087WXS9 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3EA0A087X179 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3KA0A087X1G2 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3BA6NDS4 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3FA6NER0 549 aaPredicted RBP6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3LB9A6J9 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 POC1B-GALNT4F8VUJ3 575 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 SMIM22K7EJ46 135 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 NCAM2O15394 837 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 GCATO75600 419 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3HP0C7X1 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 RXRAP19793 462 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 PROK1P58294 105 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 CNGA3Q16281 694 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TMEM63BQ5T3F8 832 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3GQ6DHY5 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3CQ6IPX1 549 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 KIAA1324Q6UXG2 1013 aaKnown RBP6.31□□□□□ -1.4
LINC00557-201ENST00000563184 RASGRP2Q7LDG7 609 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 CHSY1Q86X52 802 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 TBC1D3Q8IZP1 549 aaPredicted RBP6.31□□□□□ -1.4
LINC00557-201ENST00000563184 GALNT4Q8N4A0 578 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 HERVK_113Q902F9 699 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 HIC2Q96JB3 615 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 FYTTD1Q96QD9 318 aaKnown RBP6.31□□□□□ -1.4
LINC00557-201ENST00000563184 GATA5Q9BWX5 397 aaPredicted RBP6.31□□□□□ -1.4
LINC00557-201ENST00000563184 R3HDMLQ9H3Y0 253 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 SLITRK6Q9H5Y7 841 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 RASSF1Q9NS23 344 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 C9orf78Q9NZ63 289 aaPredicted RBP6.31□□□□□ -1.4
LINC00557-201ENST00000563184 GTF2A1LQ9UNN4 478 aa6.31□□□□□ -1.4
LINC00557-201ENST00000563184 LRRFIP2Q9Y608 721 aaKnown RBP6.31□□□□□ -1.4
LINC00557-201ENST00000563184 CYP3A7-CYP3A51PA0A087WV96 503 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 TISP43B9A030 160 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 NPHP1O15259 732 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 PAX3P23760 479 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 CYP3A7P24462 503 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 SLC8A1P32418 973 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 HOXD12P35452 270 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 PAPOLAP51003 745 aaKnown RBP6.3□□□□□ -1.4
LINC00557-201ENST00000563184 ZNF84P51523 738 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 RCAN1P53805 252 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 LRRC24Q50LG9 513 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 ANKRD45Q5TZF3 282 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 LVRNQ6Q4G3 990 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 VSTM1Q6UX27 236 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 SYNE3Q6ZMZ3 975 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 RINLQ6ZS11 566 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 LRRTM4Q86VH4 590 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 BOLLQ8N9W6 283 aaKnown RBP6.3□□□□□ -1.4
LINC00557-201ENST00000563184 CEP70Q8NHQ1 597 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 PNISRQ8TF01 805 aaKnown RBP6.3□□□□□ -1.4
LINC00557-201ENST00000563184 ASB12Q8WXK4 309 aa6.3□□□□□ -1.4
LINC00557-201ENST00000563184 KTI12Q96EK9 354 aaPredicted RBP6.3□□□□□ -1.4
LINC00557-201ENST00000563184 ZNF845Q96IR2 970 aaPredicted RBP6.3□□□□□ -1.4
LINC00557-201ENST00000563184 COG8Q96MW5 612 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms