RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 L1CAMP32004 1257 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 RFC2P35250 354 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SERPINB8P50452 374 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 EIF6P56537 245 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CORO7P57737 925 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 GMFBP60983 142 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 YWHAZP63104 245 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CYP4F2P78329 520 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ARF5P84085 180 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 GSTM4Q03013 218 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PTH1RQ03431 593 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CYP4F3Q08477 520 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 RESTQ13127 1097 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ITGB3BPQ13352 177 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 E2F2Q14209 437 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 TRIM25Q14258 630 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 DMC1Q14565 340 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 VEPH1Q14D04 833 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 HERC3Q15034 1050 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 NECTIN1Q15223 517 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 STX1AQ16623 288 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ADCK5Q3MIX3 580 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 EFHC1Q5JVL4 640 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 TEX35Q5T0J7 233 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 UBXN11Q5T124 520 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SHEQ5VZ18 495 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 DENND5AQ6IQ26 1287 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PRPF40BQ6NWY9 871 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 FBXL19Q6PCT2 694 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CWC27Q6UX04 472 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 C16orf59Q7L2K0 433 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF765Q7L2R6 523 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 KRT27Q7Z3Y8 459 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PRPF39Q86UA1 669 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SLC51BQ86UW2 128 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SGMS1Q86VZ5 419 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 MICU3Q86XE3 530 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PTRH1Q86Y79 214 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ZDHHC17Q8IUH5 632 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CACNA2D3Q8IZS8 1091 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SHISA5Q8N114 240 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 GJD3Q8N144 294 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 MAB21L3Q8N8X9 362 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PIK3C3Q8NEB9 887 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 OR9A1PQ8NGU1 263 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 KLHDC4Q8TBB5 520 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 GRIN3AQ8TCU5 1115 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CREB3L4Q8TEY5 395 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SCFD2Q8WU76 684 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 TMEM40Q8WWA1 233 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 HTRA1Q92743 480 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 KISS1RQ969F8 398 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 HDAC10Q969S8 669 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ABHD8Q96I13 439 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CAMK1GQ96NX5 476 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SELENOSQ9BQE4 189 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 NUP85Q9BW27 656 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CARD6Q9BX69 1037 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PACSIN1Q9BY11 444 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CRNKL1Q9BZJ0 848 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PITHD1Q9GZP4 211 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SENP6Q9GZR1 1112 aaPredicted RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 FAM107BQ9H098 131 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 RNF38Q9H0F5 515 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 KCNH6Q9H252 994 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 RHBGQ9H310 441 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ZMAT3Q9HA38 289 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 RC3H2Q9HBD1 1191 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PREBQ9HCU5 417 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 MID1IP1Q9NPA3 183 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 AGPAT3Q9NRZ7 376 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 NUDT15Q9NV35 164 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 UBP1Q9NZI7 540 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 FAM8A1Q9UBU6 413 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 CIDEBQ9UHD4 219 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 SLC7A8Q9UHI5 535 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 LCMT1Q9UIC8 334 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ZBTB1Q9Y2K1 713 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 RBM8AQ9Y5S9 174 aaKnown RBP5.71□□□□□ -1.5
CAPN3-211ENST00000562199 ACEP12821 1306 aa5.71□□□□□ -1.5
CAPN3-211ENST00000562199 PHRF1Q9P1Y6 1649 aaKnown RBP5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ADCY9O60503 1353 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CEMIPQ8WUJ3 1361 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 LOC100289279A0A1B0GTE1 492 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 ARHGEF37A1IGU5 675 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 XKRY2A2RUG3 117 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 WDR91A4D1P6 747 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 MEGF11A6BM72 1044 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 FOXO6A8MYZ6 492 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 H0YCG3 227 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 GOLGA8RI6L899 631 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 K7ESF4 209 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 RAD51BO15315 384 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 TP73O15350 636 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 BIRC5O15392 142 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 SRGAP3O43295 1099 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 CACNG3O60359 315 aa5.7□□□□□ -1.5
CAPN3-211ENST00000562199 GJB3O75712 270 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms