RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 GUCY1B2O75343 617 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 GCLMP48507 274 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 TUFMP49411 452 aaKnown RBP19.14■□□□□ 0.65
RAB40C-206ENST00000561781 RNASEH2BQ5TBB1 312 aaKnown RBP19.14■□□□□ 0.65
RAB40C-206ENST00000561781 RINT1Q6NUQ1 792 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 GOLM1Q8NBJ4 401 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 C1orf50Q9BV19 199 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 ZNF341Q9BYN7 854 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 COPS7BQ9H9Q2 264 aaPredicted RBP19.14■□□□□ 0.65
RAB40C-206ENST00000561781 ZFYVE28Q9HCC9 887 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 OLAHQ9NV23 265 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 ANKMY1Q9P2S6 941 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 STK39Q9UEW8 545 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 SHOC2Q9UQ13 582 aa19.14■□□□□ 0.65
RAB40C-206ENST00000561781 LIASO43766 372 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 CYP11B1P15538 503 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 EIF2AK2P19525 551 aaKnown RBP19.13■□□□□ 0.65
RAB40C-206ENST00000561781 DCKP27707 260 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 CSE1LP55060 971 aaKnown RBP19.13■□□□□ 0.65
RAB40C-206ENST00000561781 CETN1Q12798 172 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 BNIP3Q12983 259 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 EPC2Q52LR7 807 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 ANKRD26P1Q6NSI1 321 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 CENPOQ9BU64 300 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 ZNF395Q9H8N7 513 aaPredicted RBP19.13■□□□□ 0.65
RAB40C-206ENST00000561781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.13■□□□□ 0.65
RAB40C-206ENST00000561781 PI4KBQ9UBF8 816 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 SERPINB13Q9UIV8 391 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 PTBP2Q9UKA9 531 aaKnown RBP19.13■□□□□ 0.65
RAB40C-206ENST00000561781 CORINQ9Y5Q5 1042 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 A0A1W2PPW3 197 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 TRIM64BA6NI03 449 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 GMNNO75496 209 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 CD58P19256 250 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 KRT6CP48668 564 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 GAD2Q05329 585 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 HIF1AQ16665 826 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 TRIM71Q2Q1W2 868 aaKnown RBP19.13■□□□□ 0.65
RAB40C-206ENST00000561781 ACAD10Q6JQN1 1059 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 ZNF354CQ86Y25 554 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 ADGRF4Q8IZF3 695 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 ERLEC1Q96DZ1 483 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 KREMEN1Q96MU8 473 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 SERPINI1Q99574 410 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 MECRQ9BV79 373 aa19.13■□□□□ 0.65
RAB40C-206ENST00000561781 FRMD8Q9BZ67 464 aaPredicted RBP19.13■□□□□ 0.65
RAB40C-206ENST00000561781 HLA-DOAP06340 250 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 GJC1P36383 396 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 PRR16Q569H4 304 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 GRAMD2AQ8IUY3 354 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 FAM20CQ8IXL6 584 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 LRRC47Q8N1G4 583 aaKnown RBP19.12■□□□□ 0.65
RAB40C-206ENST00000561781 EBF4Q9BQW3 602 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 SLC39A3Q9BRY0 314 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 CXorf21Q9HAI6 301 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 ARHGAP26Q9UNA1 814 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 APOBEC2Q9Y235 224 aaKnown RBP19.12■□□□□ 0.65
RAB40C-206ENST00000561781 KLHL41O60662 606 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 MYO1DO94832 1006 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 SHMT1P34896 483 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 TEX44Q53QW1 395 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 ASPRV1Q53RT3 343 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 LLGL2Q6P1M3 1020 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 C16orf86Q6ZW13 317 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 GRIN3AQ8TCU5 1115 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 DLG3Q92796 817 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 ZNF597Q96LX8 424 aa19.12■□□□□ 0.65
RAB40C-206ENST00000561781 COPEO14579 308 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 SLITRK3O94933 977 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 MCF2P10911 925 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 GABPAQ06546 454 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 DPYSQ14117 519 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 MSS51Q4VC12 460 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 FGD3Q5JSP0 725 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 CES4AQ5XG92 561 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 RFPL4BQ6ZWI9 263 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 ZNF720Q7Z2F6 126 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 IGFN1Q86VF2 1251 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 HEATR4Q86WZ0 1026 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 CPNE9Q8IYJ1 553 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 KBTBD7Q8WVZ9 684 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 FIZ1Q96SL8 496 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 SIRPGQ9P1W8 387 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 CENPFP49454 3210 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 TMX2-CTNND1H3BSU7 103 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 USP2O75604 605 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-206ENST00000561781 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
RAB40C-206ENST00000561781 GABRB3P28472 473 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 GNL1P36915 607 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-206ENST00000561781 TAS2R40P59535 323 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 MRPS22P82650 360 aaKnown RBP19.11■□□□□ 0.65
RAB40C-206ENST00000561781 MTM1Q13496 603 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 CHI3L2Q15782 390 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 DGKDQ16760 1214 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 AARS2Q5JTZ9 985 aaKnown RBP19.11■□□□□ 0.65
RAB40C-206ENST00000561781 KAZNQ674X7 775 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 SH2D5Q6ZV89 423 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 ESX1Q8N693 406 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 ALPK1Q96QP1 1244 aa19.11■□□□□ 0.65
RAB40C-206ENST00000561781 PARVGQ9HBI0 331 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms