RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 IL1BP01584 269 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 KITP10721 976 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 ZFXP17010 805 aaPredicted RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 ADCYAP1R1P41586 468 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 GRIA1P42261 906 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 KPNB1Q14974 876 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 DPYSL2Q16555 572 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 KIZQ2M2Z5 673 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 RFX8Q6ZV50 586 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 FASTKD5Q7L8L6 764 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 ZDHHC17Q8IUH5 632 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 PPTC7Q8NI37 304 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 APBB2Q92870 758 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 SIGLEC10Q96LC7 697 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 ZMAT2Q96NC0 199 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 SPATA16Q9BXB7 569 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 DPEP3Q9H4B8 488 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 XAB2Q9HCS7 855 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 PPARGC1AQ9UBK2 798 aaKnown RBP11.31□□□□□ -0.6
NEIL1-202ENST00000561643 KCNH4Q9UQ05 1017 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
NEIL1-202ENST00000561643 HCRTO43612 131 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 TBX10O75333 385 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 GABBR2O75899 941 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 PDGFRBP09619 1106 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 CCDC130P13994 396 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 IRX4P78413 519 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 PPIL2Q13356 520 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 KRT72Q14CN4 511 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 GRIK4Q16099 956 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 TAPT1Q6NXT6 567 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 DENND5BQ6ZUT9 1274 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 ZNF534Q76KX8 674 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 BEST2Q8NFU1 509 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 C18orf25Q96B23 403 aaPredicted RBP11.3□□□□□ -0.6
NEIL1-202ENST00000561643 FAM192AQ9GZU8 254 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 PDP2Q9P2J9 529 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 HES2Q9Y543 173 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 NR2E3Q9Y5X4 410 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 COL1A2P08123 1366 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 CYP2C8P10632 490 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 TPSB2P20231 275 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 PTPN9P43378 593 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 CPA2P48052 419 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 NR2C2P49116 596 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 OCRLQ01968 901 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 CBLBQ13191 982 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 TPSAB1Q15661 275 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 ACSBG2Q5FVE4 666 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 CATSPER4Q7RTX7 472 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 CRLF3Q8IUI8 442 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 PPP1R14CQ8TAE6 165 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 SNRNP27Q8WVK2 155 aaKnown RBP11.3□□□□□ -0.6
NEIL1-202ENST00000561643 C7orf26Q96N11 449 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 CSPG4P5Q96PW8 444 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 TUBGCP5Q96RT8 1024 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 KCTD15Q96SI1 283 aaPredicted RBP11.3□□□□□ -0.6
NEIL1-202ENST00000561643 C16orf70Q9BSU1 422 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 APOL6Q9BWW8 343 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
NEIL1-202ENST00000561643 ZNF395Q9H8N7 513 aaPredicted RBP11.3□□□□□ -0.6
NEIL1-202ENST00000561643 KCNK4Q9NYG8 393 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 PCDHA11Q9Y5I1 949 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 PAPPA2Q9BXP8 1791 aa11.3□□□□□ -0.6
NEIL1-202ENST00000561643 OTOFQ9HC10 1997 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 FAM159BA6NKW6 160 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 LYNP07948 512 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 AMPD1P23109 780 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 MAGEA3P43357 314 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SERPINB9P50453 376 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SOWAHAQ2M3V2 549 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 CCDC185Q8N715 623 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 PPFIBP2Q8ND30 876 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SMC1BQ8NDV3 1235 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SH3TC2Q8TF17 1288 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 QKIQ96PU8 341 aaKnown RBP eCLIP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 TAS2R1Q9NYW7 299 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 WASF2Q9Y6W5 498 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 CITO14578 2027 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 ZNF487B1APH4 448 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 BST2Q10589 180 aaKnown RBP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 ZRSR2Q15696 482 aaKnown RBP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 MDH1BQ5I0G3 518 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 BSPRYQ5W0U4 402 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SLC26A9Q7LBE3 791 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SAPCD2Q86UD0 394 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 WWP1Q9H0M0 922 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 DTLQ9NZJ0 730 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SIRPGQ9P1W8 387 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 MFHAS1Q9Y4C4 1052 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 SCN1AP35498 2009 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 MAP3K7O43318 606 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 TOP3BO95985 862 aaKnown RBP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 ENO1P06733 434 aaKnown RBP11.29□□□□□ -0.6
NEIL1-202ENST00000561643 GOT1P17174 413 aa11.29□□□□□ -0.6
NEIL1-202ENST00000561643 ARL4AP40617 200 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms