RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 ACTR5Q9H9F9 607 aaPredicted RBP5.63□□□□□ -1.51
ZEB1-219ENST00000560721 YIPF1Q9Y548 306 aa5.63□□□□□ -1.51
ZEB1-219ENST00000560721 CACNA1IQ9P0X4 2223 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 WDR27A2RRH5 827 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 GMNCA6NCL1 334 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 ZNF840PA6NDX5 716 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 SFI1A8K8P3 1242 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 AP1G1O43747 822 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 PQBP1O60828 265 aaKnown RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 NUDT17P0C025 328 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 RHOQP17081 205 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 TNNI1P19237 187 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 ACOT2P49753 483 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 CLCNKAP51800 687 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 EPHB3P54753 998 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 MRPS25P82663 173 aaKnown RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 ZBTB16Q05516 673 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 SULT2A1Q06520 285 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 DHX34Q14147 1143 aaKnown RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 AAK1Q2M2I8 961 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 TDRD12Q587J7 1177 aaKnown RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 KCTD16Q68DU8 428 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 RNF165Q6ZSG1 346 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 ZNF765Q7L2R6 523 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 MCUQ8NE86 351 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 ZSCAN18Q8TBC5 510 aaPredicted RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 TATDN2Q93075 761 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 C18orf8Q96DM3 657 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 MRRFQ96E11 262 aaKnown RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 SAAL1Q96ER3 474 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 PCED1BQ96HM7 432 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 PRRX2Q99811 253 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 TMEM109Q9BVC6 243 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 CDH19Q9H159 772 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 EPB41L4BQ9H329 900 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 CCDC134Q9H6E4 229 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 SMYD3Q9H7B4 428 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 PDFQ9HBH1 243 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 NLRC4Q9NPP4 1024 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.62□□□□□ -1.516e-7■■■■■ 162.5
ZEB1-219ENST00000560721 GPR27Q9NS67 375 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 KIAA1522Q9P206 1035 aaPredicted RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 ATP8A1Q9Y2Q0 1164 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 TBKBP1A7MCY6 615 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 PGRMC1O00264 195 aaKnown RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 DCLK1O15075 740 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 CLIC2O15247 247 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 MYZAPP0CAP1 466 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 ATF6P18850 670 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 GPD1P21695 349 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 GCLMP48507 274 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 CSRP3P50461 194 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 SOX10P56693 466 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 COG7P83436 770 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 GALNT2Q10471 571 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 RPS6KA1Q15418 735 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 SHHQ15465 462 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 DBN1Q16643 649 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 ZDHHC20Q5W0Z9 365 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 TTC19Q6DKK2 380 aaPredicted RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 SCD5Q86SK9 330 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 NELFCDQ8IXH7 590 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 CCDC13Q8IYE1 715 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 OTUD6BQ8N6M0 293 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 TFAP2BQ92481 460 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 OSBPL7Q9BZF2 842 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 RAD18Q9NS91 495 aa5.62□□□□□ -1.51
ZEB1-219ENST00000560721 PACSIN2Q9UNF0 486 aaPredicted RBP5.62□□□□□ -1.51
ZEB1-219ENST00000560721 PCDH15Q96QU1 1955 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 ILVBLA1L0T0 632 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 TRDMT1O14717 391 aaKnown RBP5.61□□□□□ -1.51
ZEB1-219ENST00000560721 SH3BP5O60239 455 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 TRUB2O95900 331 aaKnown RBP5.61□□□□□ -1.51
ZEB1-219ENST00000560721 ZBED1O96006 694 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 RALAP11233 206 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 MAGEA3P43357 314 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 ATP1A2P50993 1020 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 EIF3BP55884 814 aaKnown RBP5.61□□□□□ -1.51
ZEB1-219ENST00000560721 PPP2R2AP63151 447 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 ACVR1Q04771 509 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 PCDH1Q08174 1060 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 ZNF252P-AS1Q0IIN9 211 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 SIX1Q15475 284 aaPredicted RBP5.61□□□□□ -1.51
ZEB1-219ENST00000560721 RTP2Q5QGT7 225 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 ETFBKMTQ8IXQ9 262 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 C7orf61Q8IZ16 206 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 CELF5Q8N6W0 485 aaKnown RBP5.61□□□□□ -1.51
ZEB1-219ENST00000560721 ADAMTS19Q8TE59 1207 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 IFT81Q8WYA0 676 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 LRRC39Q96DD0 335 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 TMEM169Q96HH4 297 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 GPR62Q9BZJ7 368 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 MAGEH1Q9H213 219 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 FAM114A2Q9NRY5 505 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 ZDHHC18Q9NUE0 388 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.61□□□□□ -1.517e-6■■■■□ 21.6
ZEB1-219ENST00000560721 HESX1Q9UBX0 185 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 TSPAN16Q9UKR8 245 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 TRHDEQ9UKU6 1024 aa5.61□□□□□ -1.51
ZEB1-219ENST00000560721 CAPN7Q9Y6W3 813 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms