RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 MRPS31Q92665 395 aaKnown RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 NMRAL1Q9HBL8 299 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 MIEF1Q9NQG6 463 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 CCDC154A6NI56 674 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 SASH3O75995 380 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 MED26O95402 600 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 THP07101 528 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 GCLCP48506 637 aaPredicted RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 NR2C2P49116 596 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 CDK7P50613 346 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 GCNT1Q02742 428 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 EIF2B5Q13144 721 aaKnown RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 NAB1Q13506 487 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 SPRTNQ9H040 489 aaPredicted RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 SERHL2Q9H4I8 314 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 WDR41Q9HAD4 459 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 ARMCX1Q9P291 453 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 TSPAN16Q9UKR8 245 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 TPH1P17752 444 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 LAMTOR4Q0VGL1 99 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 NEDD8Q15843 81 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 CTXN3Q4LDR2 81 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 FBXO47Q5MNV8 452 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 CCDC149Q6ZUS6 474 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 FNDC5Q8NAU1 212 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 TRPC4APQ8TEL6 797 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 TMEM169Q96HH4 297 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 UGT2B28Q9BY64 529 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 CEP41Q9BYV8 373 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 EHD4Q9H223 541 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 MID1IP1Q9NPA3 183 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 TRPM5Q9NZQ8 1165 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 MAGEA10P43363 369 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 ALDH5A1P51649 535 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 COX10Q12887 443 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 XRCC4Q13426 336 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 SHROOM1Q2M3G4 852 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 SAMD7Q7Z3H4 446 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 TXNRD3Q86VQ6 643 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 SNX32Q86XE0 403 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 SPPL2AQ8TCT8 520 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 CELF6Q96J87 481 aaKnown RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 DCUN1D5Q9BTE7 237 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 DDX3XO00571 662 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNM-203ENST00000560674 ASNA1O43681 348 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 VPS4BO75351 444 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 PPP2R1BP30154 601 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 KPNA1P52294 538 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 FAAP100Q0VG06 881 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 TRIQKQ629K1 86 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 MFSD7Q6UXD7 560 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 RORBQ92753 470 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 ZKSCAN4Q969J2 545 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 C9orf16Q9BUW7 83 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 C6orf62Q9GZU0 229 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 HDHD2Q9H0R4 259 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 AVENQ9NQS1 362 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 TPRKBQ9Y3C4 175 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 CBX4O00257 560 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 FSBPO95073 299 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 SCNN1BP51168 640 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 PHKG1Q16816 387 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 RNF180Q86T96 592 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 ZCCHC9Q8N567 271 aaKnown RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 ST13P5Q8NFI4 369 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 WDR36Q8NI36 951 aaKnown RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 GLT1D1Q96MS3 346 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 ZDHHC15Q96MV8 337 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 RTFDC1Q9BY42 306 aaPredicted RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 AGXT2Q9BYV1 514 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 DDX18Q9NVP1 670 aaKnown RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 TRHDEQ9UKU6 1024 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 PIPSLA2A3N6 862 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 RAD51BO15315 384 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 CCR1P32246 355 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 TMEM119Q4V9L6 283 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 DGKKQ5KSL6 1271 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 FAM180AQ6UWF9 173 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 CREG2Q8IUH2 290 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 HERC6Q8IVU3 1022 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 LPCAT1Q8NF37 534 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 CDRT15Q96T59 188 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 DUSP9Q99956 384 aaKnown RBP12.93□□□□□ -0.34
SYNM-203ENST00000560674 AAASQ9NRG9 546 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 RRN3Q9NYV6 651 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 DNPEPQ9ULA0 475 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
SYNM-203ENST00000560674 TTLL13PA6NNM8 815 aa12.92□□□□□ -0.34
SYNM-203ENST00000560674 HS6ST1O60243 411 aa12.92□□□□□ -0.34
SYNM-203ENST00000560674 SERPINF2P08697 491 aa12.92□□□□□ -0.34
SYNM-203ENST00000560674 ETS1P14921 441 aa12.92□□□□□ -0.34
SYNM-203ENST00000560674 SAMD4BQ5PRF9 694 aaKnown RBP12.92□□□□□ -0.34
SYNM-203ENST00000560674 VN1R5Q7Z5H4 357 aa12.92□□□□□ -0.34
SYNM-203ENST00000560674 FBXO16Q8IX29 292 aaPredicted RBP12.92□□□□□ -0.34
SYNM-203ENST00000560674 UCMAQ8WVF2 138 aa12.92□□□□□ -0.34
SYNM-203ENST00000560674 RNF145Q96MT1 663 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms