RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 PPP1R26Q5T8A7 1209 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 SHC4Q6S5L8 630 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 CHST9Q7L1S5 443 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 SCUBE3Q8IX30 993 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 IGSF8Q969P0 613 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 NXPE2Q96DL1 559 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 PIWIL1Q96J94 861 aaKnown RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 UBL7Q96S82 380 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 DUSP16Q9BY84 665 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 ACE2Q9BYF1 805 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 SLC2A11Q9BYW1 496 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 PCED1AQ9H1Q7 454 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 CLIC5Q9NZA1 410 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 DKK4Q9UBT3 224 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 CLEC4EQ9ULY5 219 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 NCKAP1Q9Y2A7 1128 aa10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 MORC2Q9Y6X9 1032 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 MUC22E2RYF6 1773 aaPredicted RBP10.97□□□□□ -0.65
CDC42BPB-207ENST00000560492 PVALEFA0A1B0GWK0 134 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 IGLV3-19P01714 112 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 ITGAVP06756 1048 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 TRIM49P0CI25 452 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 TRIM49CP0CI26 452 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 KRT13P13646 458 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 CD27P26842 260 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 GCLMP48507 274 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 VAMP7P51809 220 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 ENPP2Q13822 863 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 CNNM4Q6P4Q7 775 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 GATAD2AQ86YP4 633 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 CPXM2Q8N436 756 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 WFIKKN2Q8TEU8 576 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 RNF139Q8WU17 664 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 SKA1Q96BD8 255 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 PLD4Q96BZ4 506 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 BIRC7Q96CA5 298 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 P2RY11Q96G91 374 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 NIF3L1Q9GZT8 377 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 CYP3A43Q9HB55 503 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 AASDHPPTQ9NRN7 309 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 ABCB8Q9NUT2 735 aa10.96□□□□□ -0.65
CDC42BPB-207ENST00000560492 NYNRINQ9P2P1 1898 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 ENC1O14682 589 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 RRP8O43159 456 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 CALUO43852 315 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 YEATS4O95619 227 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 ATP5BP06576 529 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 PDIA4P13667 645 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 POLR2EP19388 210 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 CLDN6P56747 220 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 ST8SIA6P61647 398 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 RPS14P62263 151 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 CLDN10P78369 228 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 EHHADHQ08426 723 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 INCA1Q0VD86 236 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 CAMK2GQ13555 558 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 SMAD1Q15797 465 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 KMT5BQ4FZB7 885 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 PRAMEF14Q5SWL7 426 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 TMEM215Q68D42 235 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 ZNF776Q68DI1 518 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 FMNL3Q8IVF7 1028 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 AHI1Q8N157 1196 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 C1orf216Q8TAB5 229 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 TMA16Q96EY4 203 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 CNDP2Q96KP4 475 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 IPO9Q96P70 1041 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 BACH2Q9BYV9 841 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 OLA1Q9NTK5 396 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 GGA2Q9UJY4 613 aa10.95□□□□□ -0.66
CDC42BPB-207ENST00000560492 A0A087WV48 116 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 CBX4O00257 560 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 IKBKBO14920 756 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 PCDHGA12O60330 932 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 DFNA5O60443 496 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 RNASEH1O60930 286 aaKnown RBP10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 RFPL3O75679 317 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 LDOC1O95751 146 aaPredicted RBP10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 PABPC1P11940 636 aaKnown RBP10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 ITPKBP27987 946 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 HOXD9P28356 352 aaPredicted RBP10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 HLA-FP30511 346 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 TKTL1P51854 596 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 STK4Q13043 487 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 DNAJC3Q13217 504 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 CAMK2BQ13554 666 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 PTPRNQ16849 979 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 MBLAC2Q68D91 279 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 KIAA0895LQ68EN5 471 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 DBX2Q6ZNG2 339 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 PIGZQ86VD9 579 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 TMPRSS12Q86WS5 348 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 KIAA0895Q8NCT3 520 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 TAS1R2Q8TE23 839 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 BAP1Q92560 729 aa10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 NDRG1Q92597 394 aaKnown RBP10.94□□□□□ -0.66
CDC42BPB-207ENST00000560492 EDEM1Q92611 657 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms